RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 HDAC7Q8WUI4 952 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 SPIRE2Q8WWL2 714 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 IFT74Q96LB3 600 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 RIPOR3Q96MK2 946 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 PNMA5Q96PV4 448 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 RUSC1Q9BVN2 902 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 TIPINQ9BVW5 301 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 KCNH6Q9H252 994 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 CXCL16Q9H2A7 254 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 POLD4Q9HCU8 107 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 KLK14Q9P0G3 267 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 FNIP2Q9P278 1114 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 TNFSF13BQ9Y275 285 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 USP20Q9Y2K6 914 aa10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 PRG3Q9Y2Y8 225 aaPredicted RBP10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 RBM19Q9Y4C8 960 aaKnown RBP10.72□□□□□ -0.69
TMEM39A-207ENST00000482162 K7ERI5 159 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 RECQL4O94761 1208 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 KLRC2P26717 231 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 SLC12A3P55017 1021 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 PTPN21Q16825 1174 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 DCAF4L1Q3SXM0 396 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 TMEM119Q4V9L6 283 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 RARS2Q5T160 578 aaKnown RBP10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 ATF7IP2Q5U623 682 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 FUT10Q6P4F1 479 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 CD300LGQ6UXG3 332 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 CABP7Q86V35 215 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 SYT2Q8N9I0 419 aaPredicted RBP10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 ASIC4Q96FT7 647 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 AK8Q96MA6 479 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 ACO2Q99798 780 aaKnown RBP10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 PAAF1Q9BRP4 392 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 KIFC3Q9BVG8 833 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 APOL6Q9BWW8 343 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 APOL5Q9BWW9 433 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 SFXN1Q9H9B4 322 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 UPF2Q9HAU5 1272 aaKnown RBP10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 SNTG2Q9NY99 539 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 KCND2Q9NZV8 630 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 KCNG1Q9UIX4 513 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 ADAM28Q9UKQ2 775 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 HCN4Q9Y3Q4 1203 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 NR2E1Q9Y466 385 aa10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.71□□□□□ -0.69
TMEM39A-207ENST00000482162 CACNA1HO95180 2353 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 PHLPP2Q6ZVD8 1323 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 C2CD4DB7Z1M9 353 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 TMEM189-UBE2V1I3L0A0 370 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 HIP1RO75146 1068 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 URODP06132 367 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 THP07101 528 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 ADH1AP07327 375 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 PEX3P56589 373 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 SIGLEC14Q08ET2 396 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 HSP90AA2PQ14568 343 aaPredicted RBP10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 USP41Q3LFD5 358 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 ARSHQ5FYA8 562 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 MCTP1Q6DN14 999 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 TMC5Q6UXY8 1006 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 DRC1Q96MC2 740 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 MFSD14AQ96MC6 490 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 PPP1R10Q96QC0 940 aaKnown RBP10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 ADPGKQ9BRR6 497 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 FOXD4L1Q9NU39 408 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 PARP2Q9UGN5 583 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 SMC3Q9UQE7 1217 aa10.7□□□□□ -0.7
TMEM39A-207ENST00000482162 TDRD15B5MCY1 1934 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 TMEM221A6NGB7 291 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 H3BQV1 296 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 M0R296 226 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 MEFVO15553 781 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 SSBP05455 408 aaKnown RBP eCLIP10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 WEE2P0C1S8 567 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 IGFBP6P24592 240 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 GRM5P41594 1212 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 LARP1BQ659C4 914 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 BRAPQ7Z569 592 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 PLCD3Q8N3E9 789 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 TMEM87AQ8NBN3 555 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 TMEM161BQ8NDZ6 487 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 LNX1Q8TBB1 728 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 LRRC15Q8TF66 581 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 PIK3R5Q8WYR1 880 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 RABGGTAQ92696 567 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 ZNF707Q96C28 371 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 B3GALT6Q96L58 329 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 CLSTN3Q9BQT9 956 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 NT5C3AQ9H0P0 336 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 CDT1Q9H211 546 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 PLEKHA4Q9H4M7 779 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 CACNG4Q9UBN1 327 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 DPP7Q9UHL4 492 aa10.69□□□□□ -0.7
TMEM39A-207ENST00000482162 SF3B1O75533 1304 aaKnown RBP eCLIP10.68□□□□□ -0.7
TMEM39A-207ENST00000482162 SMIM28A0A1B0GU29 152 aa10.68□□□□□ -0.7
TMEM39A-207ENST00000482162 VWA3AA6NCI4 1184 aa10.68□□□□□ -0.7
TMEM39A-207ENST00000482162 CCDC169A6NNP5 214 aa10.68□□□□□ -0.7
TMEM39A-207ENST00000482162 C2CD2LO14523 706 aa10.68□□□□□ -0.7
TMEM39A-207ENST00000482162 TGM5O43548 720 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms