RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.81□□□□□ -0.36
GARNL3-217ENST00000481875 EPS15L1Q9UBC2 864 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 DUSP12Q9UNI6 340 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 MARCH6O60337 910 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 GLRA2P23416 452 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 CA8P35219 290 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 GLUD2P49448 558 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 CYP4A11Q02928 519 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 NR5A1Q13285 461 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 CAPSQ13938 189 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 NCAPH2Q6IBW4 605 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 LILRA6Q6PI73 481 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 STAMQ92783 540 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 ATOH1Q92858 354 aaPredicted RBP12.8□□□□□ -0.36
GARNL3-217ENST00000481875 COLEC11Q9BWP8 271 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 FOXP1Q9H334 677 aaPredicted RBP12.8□□□□□ -0.36
GARNL3-217ENST00000481875 MIOSQ9NXC5 875 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 WNT16Q9UBV4 365 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 MTMR6Q9Y217 621 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 TRIP11Q15643 1979 aa12.8□□□□□ -0.36
GARNL3-217ENST00000481875 FRYLO94915 3013 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 INO80B-WBP1J3KQ70 363 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 GFRA3O60609 400 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 GLUD1P00367 558 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 SPATA31C1P0DKV0 1188 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 NPR3P17342 541 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 AOC1P19801 751 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 CREMQ03060 361 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 GRIK3Q13003 919 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 ORC2Q13416 577 aaPredicted RBP12.79□□□□□ -0.36
GARNL3-217ENST00000481875 CALCRLQ16602 461 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 USP41Q3LFD5 358 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 FOXD4L5Q5VV16 416 aaPredicted RBP12.79□□□□□ -0.36
GARNL3-217ENST00000481875 CDCA2Q69YH5 1023 aaPredicted RBP12.79□□□□□ -0.36
GARNL3-217ENST00000481875 SLC27A1Q6PCB7 646 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 TAS1R1Q7RTX1 841 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 FEZF2Q8TBJ5 459 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 ASAP3Q8TDY4 903 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 FOXD4L4Q8WXT5 416 aaPredicted RBP12.79□□□□□ -0.36
GARNL3-217ENST00000481875 ZFP42Q96MM3 310 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 RTP3Q9BQQ7 232 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 SMOC2Q9H3U7 446 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 FZD8Q9H461 694 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 TUFT1Q9NNX1 390 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 MAN1C1Q9NR34 630 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 ZDHHC7Q9NXF8 308 aa12.79□□□□□ -0.36
GARNL3-217ENST00000481875 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.79□□□□□ -0.36
GARNL3-217ENST00000481875 CACNA1IQ9P0X4 2223 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 FANCMQ8IYD8 2048 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 CACNA1AO00555 2505 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 CCDC195A0A1B0GUA6 201 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 FAM205CA6NFA0 338 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 H0Y858 1186 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 NEMFO60524 1076 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 N4BP1O75113 896 aaKnown RBP12.78□□□□□ -0.36
GARNL3-217ENST00000481875 MUTP22033 750 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 MLH1P40692 756 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 OR1G1P47890 313 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 SCNN1GP51170 649 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 CWF19L1Q69YN2 538 aaKnown RBP12.78□□□□□ -0.36
GARNL3-217ENST00000481875 MCPH1Q8NEM0 835 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 ZNF707Q96C28 371 aaPredicted RBP12.78□□□□□ -0.36
GARNL3-217ENST00000481875 NT5C3AQ9H0P0 336 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 ADAM28Q9UKQ2 775 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 HES2Q9Y543 173 aa12.78□□□□□ -0.36
GARNL3-217ENST00000481875 ZFP37Q9Y6Q3 630 aaPredicted RBP12.78□□□□□ -0.36
GARNL3-217ENST00000481875 SSBP05455 408 aaKnown RBP eCLIP12.77□□□□□ -0.37
GARNL3-217ENST00000481875 ZSCAN22P10073 491 aaPredicted RBP12.77□□□□□ -0.37
GARNL3-217ENST00000481875 U2AF2P26368 475 aaKnown RBP eCLIP12.77□□□□□ -0.37
GARNL3-217ENST00000481875 NUCB2P80303 420 aa12.77□□□□□ -0.37
GARNL3-217ENST00000481875 FUT10Q6P4F1 479 aa12.77□□□□□ -0.37
GARNL3-217ENST00000481875 RTL10Q7L3V2 364 aa12.77□□□□□ -0.37
GARNL3-217ENST00000481875 CATSPER3Q86XQ3 398 aa12.77□□□□□ -0.37
GARNL3-217ENST00000481875 NOSTRINQ8IVI9 506 aa12.77□□□□□ -0.37
GARNL3-217ENST00000481875 CPB2Q96IY4 423 aa12.77□□□□□ -0.37
GARNL3-217ENST00000481875 NACC1Q96RE7 527 aa12.77□□□□□ -0.37
GARNL3-217ENST00000481875 POLR3CQ9BUI4 534 aaPredicted RBP12.77□□□□□ -0.37
GARNL3-217ENST00000481875 GPR62Q9BZJ7 368 aa12.77□□□□□ -0.37
GARNL3-217ENST00000481875 TRIM6Q9C030 488 aaPredicted RBP12.77□□□□□ -0.37
GARNL3-217ENST00000481875 MFSD1Q9H3U5 465 aa12.77□□□□□ -0.37
GARNL3-217ENST00000481875 NXF3Q9H4D5 531 aaKnown RBP12.77□□□□□ -0.37
GARNL3-217ENST00000481875 PRMT7Q9NVM4 692 aaPredicted RBP12.77□□□□□ -0.37
GARNL3-217ENST00000481875 PRG3Q9Y2Y8 225 aaPredicted RBP12.77□□□□□ -0.37
GARNL3-217ENST00000481875 VWA8A3KMH1 1905 aa12.77□□□□□ -0.37
GARNL3-217ENST00000481875 CLUHO75153 1309 aa12.77□□□□□ -0.37
GARNL3-217ENST00000481875 OTOGLQ3ZCN5 2332 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 ANHXE9PGG2 379 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 C2CD2LO14523 706 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 B4GALT5O43286 388 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 TGM5O43548 720 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 POU2F2P09086 479 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 ATP2B1P20020 1258 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 RPA1P27694 616 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 TXKP42681 527 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 TUSC3Q13454 348 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 BRAPQ7Z569 592 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 CCDC105Q8IYK2 499 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 SLC44A3Q8N4M1 653 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 PIGOQ8TEQ8 1089 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 PRKD2Q9BZL6 878 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms