RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 PKP1Q13835 747 aa20.55■□□□□ 0.88
HSPG2-210ENST00000481644 FOXD4L6Q3SYB3 417 aaPredicted RBP20.55■□□□□ 0.88
HSPG2-210ENST00000481644 FOXD4L3Q6VB84 417 aaPredicted RBP20.55■□□□□ 0.88
HSPG2-210ENST00000481644 ZBTB33Q86T24 672 aa20.55■□□□□ 0.88
HSPG2-210ENST00000481644 AUTS2Q8WXX7 1259 aa20.55■□□□□ 0.88
HSPG2-210ENST00000481644 TCHPQ9BT92 498 aa20.55■□□□□ 0.88
HSPG2-210ENST00000481644 VN1R3Q9BXE9 311 aa20.55■□□□□ 0.88
HSPG2-210ENST00000481644 ZHX3Q9H4I2 956 aa20.55■□□□□ 0.88
HSPG2-210ENST00000481644 PTPRHQ9HD43 1115 aa20.55■□□□□ 0.88
HSPG2-210ENST00000481644 MARCH5Q9NX47 278 aa20.55■□□□□ 0.88
HSPG2-210ENST00000481644 CLEC1BQ9P126 229 aa20.55■□□□□ 0.88
HSPG2-210ENST00000481644 CD207Q9UJ71 328 aa20.55■□□□□ 0.88
HSPG2-210ENST00000481644 TRIP11Q15643 1979 aa20.54■□□□□ 0.88
HSPG2-210ENST00000481644 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.54■□□□□ 0.88
HSPG2-210ENST00000481644 TNFRSF10AO00220 468 aa20.54■□□□□ 0.88
HSPG2-210ENST00000481644 PTGESO14684 152 aa20.54■□□□□ 0.88
HSPG2-210ENST00000481644 PPP6R2O75170 966 aa20.54■□□□□ 0.88
HSPG2-210ENST00000481644 ZNF131P52739 623 aa20.54■□□□□ 0.88
HSPG2-210ENST00000481644 RBM10P98175 930 aaKnown RBP20.54■□□□□ 0.88
HSPG2-210ENST00000481644 MPZL3Q6UWV2 235 aa20.54■□□□□ 0.88
HSPG2-210ENST00000481644 CCDC73Q6ZRK6 1079 aa20.54■□□□□ 0.88
HSPG2-210ENST00000481644 HAUS6Q7Z4H7 955 aa20.54■□□□□ 0.88
HSPG2-210ENST00000481644 TMEM87AQ8NBN3 555 aa20.54■□□□□ 0.88
HSPG2-210ENST00000481644 VN1R2Q8NFZ6 395 aa20.54■□□□□ 0.88
HSPG2-210ENST00000481644 MSLNLQ96KJ4 702 aa20.54■□□□□ 0.88
HSPG2-210ENST00000481644 CCDC94Q9BW85 323 aaPredicted RBP20.54■□□□□ 0.88
HSPG2-210ENST00000481644 COLEC11Q9BWP8 271 aa20.54■□□□□ 0.88
HSPG2-210ENST00000481644 K7ENM7 598 aa20.53■□□□□ 0.88
HSPG2-210ENST00000481644 THP07101 528 aa20.53■□□□□ 0.88
HSPG2-210ENST00000481644 MCF2P10911 925 aa20.53■□□□□ 0.88
HSPG2-210ENST00000481644 PROZP22891 400 aa20.53■□□□□ 0.88
HSPG2-210ENST00000481644 GRM5P41594 1212 aa20.53■□□□□ 0.88
HSPG2-210ENST00000481644 STAT6P42226 847 aa20.53■□□□□ 0.88
HSPG2-210ENST00000481644 TUSC3Q13454 348 aa20.53■□□□□ 0.88
HSPG2-210ENST00000481644 SMAD4Q13485 552 aaKnown RBP20.53■□□□□ 0.88
HSPG2-210ENST00000481644 LLGL2Q6P1M3 1020 aa20.53■□□□□ 0.88
HSPG2-210ENST00000481644 CEP120Q8N960 986 aa20.53■□□□□ 0.88
HSPG2-210ENST00000481644 BICD1Q96G01 975 aa20.53■□□□□ 0.88
HSPG2-210ENST00000481644 CXCL16Q9H2A7 254 aa20.53■□□□□ 0.88
HSPG2-210ENST00000481644 ANKFY1Q9P2R3 1169 aa20.53■□□□□ 0.88
HSPG2-210ENST00000481644 IRAK3Q9Y616 596 aa20.53■□□□□ 0.88
HSPG2-210ENST00000481644 F8W810 466 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 ABLIM1O14639 778 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 MBTPS2O43462 519 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 TRAK2O60296 914 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 TOM1L1O75674 476 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 SOD2P04179 222 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 HARSP12081 509 aaKnown RBP20.52■□□□□ 0.88
HSPG2-210ENST00000481644 SCP2P22307 547 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 YARSP54577 528 aaKnown RBP20.52■□□□□ 0.88
HSPG2-210ENST00000481644 OSTNP61366 133 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 COASYQ13057 564 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 KCNC3Q14003 757 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 PTPN14Q15678 1187 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 ZPBP2Q6X784 338 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 SV2BQ7L1I2 683 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 DYMQ7RTS9 669 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 RABGGTAQ92696 567 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 ZBTB45Q96K62 511 aaPredicted RBP20.52■□□□□ 0.88
HSPG2-210ENST00000481644 HERC2P3Q9BVR0 1158 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 PANK2Q9BZ23 570 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 TOPORSQ9NS56 1045 aaPredicted RBP20.52■□□□□ 0.88
HSPG2-210ENST00000481644 CACNG4Q9UBN1 327 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 CITO14578 2027 aa20.52■□□□□ 0.88
HSPG2-210ENST00000481644 CUL9Q8IWT3 2517 aa20.52■□□□□ 0.87
HSPG2-210ENST00000481644 A0A087X0B3 334 aa20.51■□□□□ 0.87
HSPG2-210ENST00000481644 CASTOR2A6NHX0 329 aa20.51■□□□□ 0.87
HSPG2-210ENST00000481644 CLASP2O75122 1294 aaKnown RBP20.51■□□□□ 0.87
HSPG2-210ENST00000481644 BRD1O95696 1058 aa20.51■□□□□ 0.87
HSPG2-210ENST00000481644 NOLC1Q14978 699 aaKnown RBP eCLIP20.51■□□□□ 0.87
HSPG2-210ENST00000481644 ATL3Q6DD88 541 aa20.51■□□□□ 0.87
HSPG2-210ENST00000481644 TMEM184AQ6ZMB5 413 aa20.51■□□□□ 0.87
HSPG2-210ENST00000481644 FAM178BQ8IXR5 827 aa20.51■□□□□ 0.87
HSPG2-210ENST00000481644 PDILTQ8N807 584 aa20.51■□□□□ 0.87
HSPG2-210ENST00000481644 SMRP1Q8NCR6 262 aa20.51■□□□□ 0.87
HSPG2-210ENST00000481644 DDX12PQ92771 950 aa20.51■□□□□ 0.87
HSPG2-210ENST00000481644 KCNN1Q92952 543 aa20.51■□□□□ 0.87
HSPG2-210ENST00000481644 MRPL17Q9NRX2 175 aaKnown RBP20.51■□□□□ 0.87
HSPG2-210ENST00000481644 HCFC2Q9Y5Z7 792 aa20.51■□□□□ 0.87
HSPG2-210ENST00000481644 MYMKA6NI61 221 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 CUTAO60888 179 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 URODP06132 367 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 MATR3P43243 847 aaKnown RBP eCLIP20.5■□□□□ 0.87
HSPG2-210ENST00000481644 HSP90AA2PQ14568 343 aaPredicted RBP20.5■□□□□ 0.87
HSPG2-210ENST00000481644 NAB2Q15742 525 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 SMAD2Q15796 467 aaKnown RBP20.5■□□□□ 0.87
HSPG2-210ENST00000481644 GLRA4Q5JXX5 417 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 KCNG4Q8TDN1 519 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 CASP10Q92851 521 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 ACAP3Q96P50 834 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 PAAF1Q9BRP4 392 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 EMILIN2Q9BXX0 1053 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 ADAM28Q9UKQ2 775 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 CFAP45Q9UL16 551 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 TBX20Q9UMR3 447 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 TTC28Q96AY4 2481 aa20.5■□□□□ 0.87
HSPG2-210ENST00000481644 C2CD2LO14523 706 aa20.49■□□□□ 0.87
HSPG2-210ENST00000481644 CLDN3O15551 220 aa20.49■□□□□ 0.87
HSPG2-210ENST00000481644 TADA2AO75478 443 aa20.49■□□□□ 0.87
HSPG2-210ENST00000481644 EFEMP2O95967 443 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms