RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 KLHDC7AQ5VTJ3 777 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 PPP1R21Q6ZMI0 780 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 BBS5Q8N3I7 341 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 CCDC188H7C350 402 aa20.58■□□□□ 0.89
CCM2-214ENST00000481194 PSMC6P62333 389 aa20.58■□□□□ 0.89
CCM2-214ENST00000481194 LAMTOR4Q0VGL1 99 aa20.58■□□□□ 0.89
CCM2-214ENST00000481194 SLC18A3Q16572 532 aa20.58■□□□□ 0.89
CCM2-214ENST00000481194 SPRYD7Q5W111 196 aa20.58■□□□□ 0.89
CCM2-214ENST00000481194 KCTD6Q8NC69 237 aa20.58■□□□□ 0.89
CCM2-214ENST00000481194 GPRC5CQ9NQ84 441 aa20.58■□□□□ 0.89
CCM2-214ENST00000481194 MCF2LO15068 1137 aa20.58■□□□□ 0.89
CCM2-214ENST00000481194 CGRRF1Q99675 332 aa20.58■□□□□ 0.89
CCM2-214ENST00000481194 ZNF148Q9UQR1 794 aa20.58■□□□□ 0.89
CCM2-214ENST00000481194 CTSHP09668 335 aa20.58■□□□□ 0.89
CCM2-214ENST00000481194 SLURP2P0DP57 97 aa20.58■□□□□ 0.89
CCM2-214ENST00000481194 MFSD10Q14728 455 aa20.58■□□□□ 0.89
CCM2-214ENST00000481194 NPTXRO95502 500 aa20.58■□□□□ 0.88
CCM2-214ENST00000481194 MDM2Q00987 491 aaPredicted RBP20.58■□□□□ 0.88
CCM2-214ENST00000481194 FOXR2Q6PJQ5 311 aa20.58■□□□□ 0.88
CCM2-214ENST00000481194 ZPBP2Q6X784 338 aa20.58■□□□□ 0.88
CCM2-214ENST00000481194 ANAPC7Q9UJX3 599 aa20.58■□□□□ 0.88
CCM2-214ENST00000481194 ENC1O14682 589 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 PRPSAP1Q14558 356 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 ZNF564Q8TBZ8 553 aaPredicted RBP20.57■□□□□ 0.88
CCM2-214ENST00000481194 MAGOHBQ96A72 148 aaKnown RBP20.57■□□□□ 0.88
CCM2-214ENST00000481194 PARVAQ9NVD7 372 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 CNTNAP1P78357 1384 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 GLB1LQ6UWU2 654 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 STAP1Q9ULZ2 295 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 MCF2P10911 925 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 INSRRP14616 1297 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 CLCN3P51790 818 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 WDR72Q3MJ13 1102 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 ZNF394Q53GI3 561 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 MOB2Q70IA6 237 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 ABRAQ8N0Z2 381 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 FAM76AQ8TAV0 307 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 FTLP02792 175 aaPredicted RBP20.57■□□□□ 0.88
CCM2-214ENST00000481194 PCBP1Q15365 356 aaKnown RBP eCLIP20.57■□□□□ 0.88
CCM2-214ENST00000481194 DENND2CQ68D51 928 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.57■□□□□ 0.88
CCM2-214ENST00000481194 ZNF112Q9UJU3 913 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 A0A087X0B3 334 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 H7C0C1 242 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 ATP5OP48047 213 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 ARPP19P56211 112 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 APBA1Q02410 837 aa20.57■□□□□ 0.88
CCM2-214ENST00000481194 DDX56Q9NY93 547 aaKnown RBP20.57■□□□□ 0.88
CCM2-214ENST00000481194 PALMO75781 387 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 CLK2P49760 499 aaKnown RBP20.56■□□□□ 0.88
CCM2-214ENST00000481194 WNT8AQ9H1J5 351 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 TMEM134Q9H6X4 195 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 RGS17Q9UGC6 210 aaPredicted RBP20.56■□□□□ 0.88
CCM2-214ENST00000481194 CCDC88AQ3V6T2 1871 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 ECEL1O95672 775 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 SLC1A1P43005 524 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 NOP14P78316 857 aaKnown RBP20.56■□□□□ 0.88
CCM2-214ENST00000481194 COL9A3Q14050 684 aaPredicted RBP20.56■□□□□ 0.88
CCM2-214ENST00000481194 COBLL1Q53SF7 1204 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 WDR49Q8IV35 697 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 NME8Q8N427 588 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 KIAA0895Q8NCT3 520 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 INPP4AQ96PE3 977 aaPredicted RBP20.56■□□□□ 0.88
CCM2-214ENST00000481194 NUP85Q9BW27 656 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 UVRAGQ9P2Y5 699 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 DDX41Q9UJV9 622 aaKnown RBP20.56■□□□□ 0.88
CCM2-214ENST00000481194 PCDHB2Q9Y5E7 798 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 GRID2IPA4D2P6 1211 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 HOXA2O43364 376 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 PSEN2P49810 448 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 CBX1P83916 185 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 NFRKBQ6P4R8 1299 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 C1orf186Q6ZWK4 172 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 KSR1Q8IVT5 923 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 C4orf32Q8N8J7 132 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 TTC13Q8NBP0 860 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 SELENOSQ9BQE4 189 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 KIFC3Q9BVG8 833 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 NKIRAS1Q9NYS0 192 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 TLDC2A0PJX2 215 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 KAZNQ674X7 775 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 OGFRQ9NZT2 677 aa20.56■□□□□ 0.88
CCM2-214ENST00000481194 IFNB1P01574 187 aa20.55■□□□□ 0.88
CCM2-214ENST00000481194 LGALS2P05162 132 aa20.55■□□□□ 0.88
CCM2-214ENST00000481194 ITIH3Q06033 890 aa20.55■□□□□ 0.88
CCM2-214ENST00000481194 GLE1Q53GS7 698 aaKnown RBP20.55■□□□□ 0.88
CCM2-214ENST00000481194 C11orf70Q9BRQ4 267 aa20.55■□□□□ 0.88
CCM2-214ENST00000481194 CYP26A1O43174 497 aa20.55■□□□□ 0.88
CCM2-214ENST00000481194 RAB27AP51159 221 aa20.55■□□□□ 0.88
CCM2-214ENST00000481194 SHROOM1Q2M3G4 852 aaPredicted RBP20.55■□□□□ 0.88
CCM2-214ENST00000481194 LMBRD2Q68DH5 695 aaPredicted RBP20.55■□□□□ 0.88
CCM2-214ENST00000481194 INTUQ9ULD6 942 aa20.55■□□□□ 0.88
CCM2-214ENST00000481194 ASTN2O75129 1339 aaPredicted RBP20.55■□□□□ 0.88
CCM2-214ENST00000481194 RTP1P59025 263 aa20.55■□□□□ 0.88
CCM2-214ENST00000481194 RBBP8NLQ8NC74 664 aaPredicted RBP20.55■□□□□ 0.88
CCM2-214ENST00000481194 TJP3O95049 919 aa20.55■□□□□ 0.88
CCM2-214ENST00000481194 KRT12Q99456 494 aa20.55■□□□□ 0.88
CCM2-214ENST00000481194 FHOD1Q9Y613 1164 aa20.55■□□□□ 0.88
CCM2-214ENST00000481194 KRT7P08729 469 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 ZNF286BP0CG31 522 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms