RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 BLZF1Q9H2G9 400 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 MARCH5Q9NX47 278 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 LARSQ9P2J5 1176 aaKnown RBP13.41□□□□□ -0.26
PTPRF-213ENST00000481019 SERTAD1Q9UHV2 236 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 KCNH3Q9ULD8 1083 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 HPSEQ9Y251 543 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 TRIP11Q15643 1979 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 NRP1O14786 923 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 FSCN2O14926 492 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 PPP1R37O75864 691 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 MYBP10242 640 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 IDEP14735 1019 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 CMA1P23946 247 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 NDUFA8P51970 172 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 PLCB3Q01970 1234 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 TFF2Q03403 129 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 HYAL1Q12794 435 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 STRN3Q13033 797 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 DCAF4L1Q3SXM0 396 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 MPZL3Q6UWV2 235 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 ZNF720Q7Z2F6 126 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 FAM178BQ8IXR5 827 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 IQUBQ8NA54 791 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 CCDC34Q96HJ3 373 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 TRIM9Q9C026 710 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 LMAN2LQ9H0V9 348 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 TNMDQ9H2S6 317 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 UBN1Q9NPG3 1134 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 AAASQ9NRG9 546 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 PANK4Q9NVE7 773 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 FAM13BQ9NYF5 915 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 SPG21Q9NZD8 308 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 ANKFY1Q9P2R3 1169 aa13.4□□□□□ -0.26
PTPRF-213ENST00000481019 FAM237AA0A1B0GTK4 181 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 A0A1W2PQ27 194 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 A0A1W2PQ64 194 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 A0A1W2PQD8 194 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 HIDE1A8MVS5 230 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 LINC01565O15544 149 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 FAM189A1O60320 539 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 LETM1O95202 739 aaPredicted RBP13.39□□□□□ -0.27
PTPRF-213ENST00000481019 PIGRP01833 764 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 MCF2P10911 925 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 TNFSF9P41273 254 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 GRM5P41594 1212 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 AFMP43652 599 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 RBM10P98175 930 aaKnown RBP13.39□□□□□ -0.27
PTPRF-213ENST00000481019 MCL1Q07820 350 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 COASYQ13057 564 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 CUL4BQ13620 913 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 PTPROQ16827 1216 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 GLRA4Q5JXX5 417 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 ALKAL1Q6UXT8 129 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 ZPBP2Q6X784 338 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 TAS1R1Q7RTX1 841 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 MAP4K3Q8IVH8 894 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 ZSWIM2Q8NEG5 633 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 AUTS2Q8WXX7 1259 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 MRPS27Q92552 414 aaKnown RBP13.39□□□□□ -0.27
PTPRF-213ENST00000481019 IGSF21Q96ID5 467 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 ZMAT2Q96NC0 199 aaKnown RBP13.39□□□□□ -0.27
PTPRF-213ENST00000481019 C7orf25Q9BPX7 421 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 PYM1Q9BRP8 204 aaKnown RBP13.39□□□□□ -0.27
PTPRF-213ENST00000481019 ADPGKQ9BRR6 497 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 ST6GALNAC4Q9H4F1 302 aa13.39□□□□□ -0.27
PTPRF-213ENST00000481019 NSUN3Q9H649 340 aaKnown RBP13.39□□□□□ -0.27
PTPRF-213ENST00000481019 PRG3Q9Y2Y8 225 aaPredicted RBP13.39□□□□□ -0.27
PTPRF-213ENST00000481019 PER2O15055 1255 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 TOM1L1O75674 476 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 EFEMP2O95967 443 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 GAP43P17677 238 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 HOXD13P35453 343 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 OR1G1P47890 313 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 ALDH7A1P49419 539 aaKnown RBP13.38□□□□□ -0.27
PTPRF-213ENST00000481019 SOX4Q06945 474 aaPredicted RBP13.38□□□□□ -0.27
PTPRF-213ENST00000481019 SKIV2LQ15477 1246 aaKnown RBP13.38□□□□□ -0.27
PTPRF-213ENST00000481019 TIGD5Q53EQ6 642 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 HERC4Q5GLZ8 1057 aaPredicted RBP13.38□□□□□ -0.27
PTPRF-213ENST00000481019 PLPP4Q5VZY2 271 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 CNNM4Q6P4Q7 775 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 RBM23Q86U06 439 aaKnown RBP13.38□□□□□ -0.27
PTPRF-213ENST00000481019 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.38□□□□□ -0.27
PTPRF-213ENST00000481019 BICD1Q96G01 975 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 PAGE5Q96GU1 130 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 PPP1R10Q96QC0 940 aaKnown RBP13.38□□□□□ -0.27
PTPRF-213ENST00000481019 TMEM175Q9BSA9 504 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 TCHPQ9BT92 498 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 CUEDC2Q9H467 287 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 MRPL44Q9H9J2 332 aaKnown RBP13.38□□□□□ -0.27
PTPRF-213ENST00000481019 TLR9Q9NR96 1032 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 KANSL3Q9P2N6 904 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 LZTS1Q9Y250 596 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 C5orf42Q9H799 3197 aa13.38□□□□□ -0.27
PTPRF-213ENST00000481019 ZMYM2Q9UBW7 1377 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 CASTOR2A6NHX0 329 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 KLRC4O43908 158 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 PRPF6O94906 941 aaKnown RBP13.37□□□□□ -0.27
PTPRF-213ENST00000481019 SLFN14P0C7P3 912 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 PRR29P0C7W0 189 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 ADSSP30520 456 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms