RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 TOM1L1O75674 476 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 SMC2O95347 1197 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 FGFR1P11362 822 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 SCP2P22307 547 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 PRCPP42785 496 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 MCL1Q07820 350 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 NCBP1Q09161 790 aaKnown RBP13.39□□□□□ -0.27
TRA2B-212ENST00000480461 MORC3Q14149 939 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 ZBTB41Q5SVQ8 909 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 AGMOQ6ZNB7 445 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 FAM43BQ6ZT52 329 aaPredicted RBP13.39□□□□□ -0.27
TRA2B-212ENST00000480461 NELFCDQ8IXH7 590 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 MYOCDQ8IZQ8 938 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 CEP120Q8N960 986 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.39□□□□□ -0.27
TRA2B-212ENST00000480461 HVCN1Q96D96 273 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 KCTD10Q9H3F6 313 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 NXF3Q9H4D5 531 aaKnown RBP13.39□□□□□ -0.27
TRA2B-212ENST00000480461 C1orf112Q9NSG2 853 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 IPPQ9Y573 584 aa13.39□□□□□ -0.27
TRA2B-212ENST00000480461 MYH11P35749 1972 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 PPP1R3GB7ZBB8 358 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 N4BP3O15049 544 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 EIF3DO15371 548 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRA2B-212ENST00000480461 EFCAB14O75071 495 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 DGKIO75912 1065 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 GJB5O95377 273 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 AMHP03971 560 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 IL9P15248 144 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 AKAP5P24588 427 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 SSTR3P32745 418 aaPredicted RBP13.38□□□□□ -0.27
TRA2B-212ENST00000480461 ALCAMQ13740 583 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 NFKBIBQ15653 356 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 KNOP1Q1ED39 458 aaKnown RBP13.38□□□□□ -0.27
TRA2B-212ENST00000480461 LEXMQ3ZCV2 418 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 CLLU1OSQ5K130 101 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 ZNF658Q5TYW1 1059 aaPredicted RBP13.38□□□□□ -0.27
TRA2B-212ENST00000480461 MPZL3Q6UWV2 235 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 RBM43Q6ZSC3 357 aaKnown RBP13.38□□□□□ -0.27
TRA2B-212ENST00000480461 GSTCDQ8NEC7 633 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 ZNF689Q96CS4 500 aaPredicted RBP13.38□□□□□ -0.27
TRA2B-212ENST00000480461 CCDC51Q96ER9 411 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 FBXL18Q96ME1 805 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 NUP62CLQ9H1M0 184 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 ELAC1Q9H777 363 aaKnown RBP13.38□□□□□ -0.27
TRA2B-212ENST00000480461 RC3H2Q9HBD1 1191 aaKnown RBP13.38□□□□□ -0.27
TRA2B-212ENST00000480461 TMEM161AQ9NX61 479 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 MIOSQ9NXC5 875 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 HOOK1Q9UJC3 728 aaKnown RBP13.38□□□□□ -0.27
TRA2B-212ENST00000480461 PCDHB7Q9Y5E2 793 aa13.38□□□□□ -0.27
TRA2B-212ENST00000480461 TTC3P53804 2025 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 HNRNPDLO14979 420 aaKnown RBP13.37□□□□□ -0.27
TRA2B-212ENST00000480461 CLDN3O15551 220 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 OFD1O75665 1012 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 EOMESO95936 686 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 MBD3O95983 291 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 ALADP13716 330 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 KCNA5P22460 613 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 TNFSF9P41273 254 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 KCNJ6P48051 423 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 LIG4P49917 911 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 PMS1P54277 932 aaKnown RBP13.37□□□□□ -0.27
TRA2B-212ENST00000480461 HTRA4P83105 476 aaPredicted RBP13.37□□□□□ -0.27
TRA2B-212ENST00000480461 CRELD2Q6UXH1 353 aaPredicted RBP13.37□□□□□ -0.27
TRA2B-212ENST00000480461 LRRC55Q6ZSA7 311 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 NPAS4Q8IUM7 802 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 THNSL1Q8IYQ7 743 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 ADSSL1Q8N142 457 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 RNF169Q8NCN4 708 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 BICD1Q96G01 975 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 CCDC34Q96HJ3 373 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 CASD1Q96PB1 797 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 MED15Q96RN5 788 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 CBWD1Q9BRT8 395 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 TCHPQ9BT92 498 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 KCNH6Q9H252 994 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 SNTG2Q9NY99 539 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 ANKFY1Q9P2R3 1169 aa13.37□□□□□ -0.27
TRA2B-212ENST00000480461 CLIC2O15247 247 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 LINC00271P0C7V0 271 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 MCF2P10911 925 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 ABCD1P33897 745 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 OSTNP61366 133 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 TMEM132AQ24JP5 1023 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 ZNF568Q3ZCX4 644 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 COBLL1Q53SF7 1204 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 ALKAL1Q6UXT8 129 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 SYCP3Q8IZU3 236 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 GUF1Q8N442 669 aaKnown RBP13.36□□□□□ -0.27
TRA2B-212ENST00000480461 ZFP42Q96MM3 310 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 APOL6Q9BWW8 343 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 PCIF1Q9H4Z3 704 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 TMEM206Q9H813 350 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 AGPAT3Q9NRZ7 376 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 RMND1Q9NWS8 449 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 KLK14Q9P0G3 267 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 HCSTQ9UBK5 93 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 MTUS1Q9ULD2 1270 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 COL4A6Q14031 1691 aa13.36□□□□□ -0.27
TRA2B-212ENST00000480461 ZNF318Q5VUA4 2279 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms