RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TIPINQ9BVW5 301 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 INO80BQ9C086 356 aaPredicted RBP9.97□□□□□ -0.81
VCP-206ENST00000480327 TMEM117Q9H0C3 514 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 TNMDQ9H2S6 317 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 SMOC2Q9H3U7 446 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 MINDY3Q9H8M7 445 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 KMT5AQ9NQR1 393 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 AAASQ9NRG9 546 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 FAM86C1Q9NVL1 165 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 KCND2Q9NZV8 630 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 TBC1D7Q9P0N9 293 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 ODF2LQ9ULJ1 636 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 USP20Q9Y2K6 914 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 TDRD15B5MCY1 1934 aaKnown RBP9.96□□□□□ -0.81
VCP-206ENST00000480327 MTCL1Q9Y4B5 1905 aaKnown RBP9.96□□□□□ -0.81
VCP-206ENST00000480327 B4GALT3O60512 393 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 PLS3P13797 630 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 PTENP60484 403 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 CUL4BQ13620 913 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 PPP2R5AQ15172 486 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 PDE12Q6L8Q7 609 aaKnown RBP9.96□□□□□ -0.82
VCP-206ENST00000480327 KANK3Q6NY19 840 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 FAM43BQ6ZT52 329 aaPredicted RBP9.96□□□□□ -0.82
VCP-206ENST00000480327 CATSPER4Q7RTX7 472 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 SRGAP1Q7Z6B7 1085 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 TMEM173Q86WV6 379 aaPredicted RBP9.96□□□□□ -0.82
VCP-206ENST00000480327 SFR1Q86XK3 245 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 ZBTB8OSQ8IWT0 167 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 SLC39A11Q8N1S5 342 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 BCL7CQ8WUZ0 217 aaPredicted RBP9.96□□□□□ -0.82
VCP-206ENST00000480327 ERCC4Q92889 916 aaPredicted RBP9.96□□□□□ -0.82
VCP-206ENST00000480327 HPS3Q969F9 1004 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 C7orf25Q9BPX7 421 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 TRIM9Q9C026 710 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 LRRC27Q9C0I9 530 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 POMKQ9H5K3 350 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 MAGEF1Q9HAY2 307 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 PARVGQ9HBI0 331 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 LMBRD1Q9NUN5 540 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 PANK4Q9NVE7 773 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 USP25Q9UHP3 1055 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 FRYLO94915 3013 aa9.96□□□□□ -0.82
VCP-206ENST00000480327 DOCK8Q8NF50 2099 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 C2orf71A6NGG8 1288 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 MEIS3P2A8K0S8 358 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 NT5C1B-RDH14C9J2C7 533 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 GOLGA6L22H0YM25 854 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 K7ENM7 598 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 B4GALT5O43286 388 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 TRAK2O60296 914 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 KINO60870 393 aaKnown RBP9.95□□□□□ -0.82
VCP-206ENST00000480327 CLASP2O75122 1294 aaKnown RBP9.95□□□□□ -0.82
VCP-206ENST00000480327 ERLIN2O94905 339 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 WEE2P0C1S8 567 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 SFPQP23246 707 aaKnown RBP eCLIP9.95□□□□□ -0.82
VCP-206ENST00000480327 NMT1P30419 496 aaKnown RBP9.95□□□□□ -0.82
VCP-206ENST00000480327 AVPR2P30518 371 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 SMTNP53814 917 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 PTPN5P54829 565 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 MBTD1Q05BQ5 628 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 CCDC65Q8IXS2 484 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 ZNF710Q8N1W2 664 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 LRRC43Q8N309 656 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 MRPL43Q8N983 215 aaKnown RBP9.95□□□□□ -0.82
VCP-206ENST00000480327 HELQQ8TDG4 1101 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 CPB2Q96IY4 423 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 ZNF558Q96NG5 402 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 VN1R3Q9BXE9 311 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 ENTPD7Q9NQZ7 604 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 DACT1Q9NYF0 836 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 LARSQ9P2J5 1176 aaKnown RBP9.95□□□□□ -0.82
VCP-206ENST00000480327 HCFC2Q9Y5Z7 792 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 DOCK6Q96HP0 2047 aa9.95□□□□□ -0.82
VCP-206ENST00000480327 DMXL1Q9Y485 3027 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 ZNF292O60281 2723 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 A0A0U1RQF3 1178 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 TTLL13PA6NNM8 815 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 C2CD4DB7Z1M9 353 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 K7ERI5 159 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 TSPAN1O60635 241 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 EDN1P05305 212 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 PRKCBP05771 671 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 ZNF131P52739 623 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 POU5F1BQ06416 359 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 PNOCQ13519 176 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 TMEM132AQ24JP5 1023 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 ZC2HC1CQ53FD0 456 aaPredicted RBP9.94□□□□□ -0.82
VCP-206ENST00000480327 CDCA2Q69YH5 1023 aaPredicted RBP9.94□□□□□ -0.82
VCP-206ENST00000480327 HAUS6Q7Z4H7 955 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 CDR2LQ86X02 465 aaPredicted RBP9.94□□□□□ -0.82
VCP-206ENST00000480327 SUGP1Q8IWZ8 645 aaKnown RBP9.94□□□□□ -0.82
VCP-206ENST00000480327 C12orf76Q8N812 135 aaPredicted RBP9.94□□□□□ -0.82
VCP-206ENST00000480327 SPIRE2Q8WWL2 714 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 AUTS2Q8WXX7 1259 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 FGFBP2Q9BYJ0 223 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 C2orf40Q9H1Z8 148 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 MRPL44Q9H9J2 332 aaKnown RBP9.94□□□□□ -0.82
VCP-206ENST00000480327 C17orf75Q9HAS0 396 aa9.94□□□□□ -0.82
VCP-206ENST00000480327 NGRNQ9NPE2 291 aaKnown RBP9.94□□□□□ -0.82
VCP-206ENST00000480327 SPG21Q9NZD8 308 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms