RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 C11orf49Q9H6J7 331 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 CHST12Q9NRB3 414 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 CPSF3Q9UKF6 684 aaKnown RBP13.68□□□□□ -0.22
SIK3-209ENST00000480222 PIN4Q9Y237 131 aaKnown RBP13.68□□□□□ -0.22
SIK3-209ENST00000480222 NOC2LQ9Y3T9 749 aaKnown RBP13.68□□□□□ -0.22
SIK3-209ENST00000480222 CENPFP49454 3210 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 DCDC2CA8MYV0 355 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 TEX33O43247 280 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 PQBP1O60828 265 aaKnown RBP13.67□□□□□ -0.22
SIK3-209ENST00000480222 IL18RAPO95256 599 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 CLTAP09496 248 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 SELPP16109 830 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 FGFR4P22455 802 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 HOXA11P31270 313 aaPredicted RBP13.67□□□□□ -0.22
SIK3-209ENST00000480222 GRM5P41594 1212 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 CLDN10P78369 228 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 CETN1Q12798 172 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 PAK2Q13177 524 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 ZNF618Q5T7W0 954 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 CRELD2Q6UXH1 353 aaPredicted RBP13.67□□□□□ -0.22
SIK3-209ENST00000480222 LRRC8DQ7L1W4 858 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 TMC6Q7Z403 805 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 RDH13Q8NBN7 331 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 PARD3BQ8TEW8 1205 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 FNBP1Q96RU3 617 aa13.67□□□□□ -0.22
SIK3-209ENST00000480222 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.67□□□□□ -0.22
SIK3-209ENST00000480222 ANK1P16157 1881 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 PARNO95453 639 aaKnown RBP13.66□□□□□ -0.22
SIK3-209ENST00000480222 TRIM49P0CI25 452 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 TRIM49CP0CI26 452 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 DEKP35659 375 aaKnown RBP13.66□□□□□ -0.22
SIK3-209ENST00000480222 FMO5P49326 533 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 ACOT2P49753 483 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 MXI1P50539 228 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 AP3M2P53677 418 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 GSDMDP57764 484 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 MYL7Q01449 175 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 LPIN1Q14693 890 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 FIGNQ5HY92 759 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 TRAF7Q6Q0C0 670 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 NECAB2Q7Z6G3 386 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 ZSWIM2Q8NEG5 633 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 DIS3LQ8TF46 1054 aaKnown RBP13.66□□□□□ -0.22
SIK3-209ENST00000480222 CGRRF1Q99675 332 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 NUP58Q9BVL2 599 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 CCDC94Q9BW85 323 aaPredicted RBP13.66□□□□□ -0.22
SIK3-209ENST00000480222 TRIM6Q9C030 488 aaPredicted RBP13.66□□□□□ -0.22
SIK3-209ENST00000480222 ERVK-5Q9HDB9 667 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 DAAM1Q9Y4D1 1078 aa13.66□□□□□ -0.22
SIK3-209ENST00000480222 CITO14578 2027 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 LRRIQ3A6PVS8 624 aaPredicted RBP13.65□□□□□ -0.22
SIK3-209ENST00000480222 NPTXRO95502 500 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 TPM1P09493 284 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 GHRP10912 638 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 RAB27AP51159 221 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 ATN1P54259 1190 aaPredicted RBP13.65□□□□□ -0.22
SIK3-209ENST00000480222 SYCP1Q15431 976 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 TRIM60Q495X7 471 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 ZBTB41Q5SVQ8 909 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 GBP6Q6ZN66 633 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 CDR2LQ86X02 465 aaPredicted RBP13.65□□□□□ -0.22
SIK3-209ENST00000480222 WDR49Q8IV35 697 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 CD302Q8IX05 232 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 THNSL1Q8IYQ7 743 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 HACE1Q8IYU2 909 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 PLEKHO2Q8TD55 490 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 CCDC127Q96BQ5 260 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 TRAIPQ9BWF2 469 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 ASB7Q9H672 318 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 RPF1Q9H9Y2 349 aaKnown RBP13.65□□□□□ -0.22
SIK3-209ENST00000480222 TMEM8AQ9HCN3 771 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 TOPORSQ9NS56 1045 aaPredicted RBP13.65□□□□□ -0.22
SIK3-209ENST00000480222 ST3GAL5Q9UNP4 418 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 SIK3Q9Y2K2 1263 aa13.65□□□□□ -0.22
SIK3-209ENST00000480222 PDCD11Q14690 1871 aaKnown RBP13.64□□□□□ -0.23
SIK3-209ENST00000480222 PTMAP06454 111 aaKnown RBP13.64□□□□□ -0.23
SIK3-209ENST00000480222 STAG3L1P0CL83 205 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 DLATP10515 647 aaKnown RBP13.64□□□□□ -0.23
SIK3-209ENST00000480222 ZSCAN20P17040 1043 aaPredicted RBP13.64□□□□□ -0.23
SIK3-209ENST00000480222 RFX1P22670 979 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 CD52P31358 61 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 TNFSF9P41273 254 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 YARSP54577 528 aaKnown RBP13.64□□□□□ -0.23
SIK3-209ENST00000480222 DLG4P78352 724 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 PPP3CAQ08209 521 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 ENOX2Q16206 610 aaKnown RBP13.64□□□□□ -0.23
SIK3-209ENST00000480222 EXOC3L4Q17RC7 722 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 C1orf220Q5T0J3 134 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 KRT39Q6A163 491 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 TWF2Q6IBS0 349 aaKnown RBP13.64□□□□□ -0.23
SIK3-209ENST00000480222 NT5DC4Q86YG4 428 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 CEP120Q8N960 986 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 SPC24Q8NBT2 197 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 CCDC150Q8NCX0 1101 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 PAWRQ96IZ0 340 aaKnown RBP13.64□□□□□ -0.23
SIK3-209ENST00000480222 ACAP3Q96P50 834 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 TSPAN18Q96SJ8 248 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 AGO3Q9H9G7 860 aaKnown RBP13.64□□□□□ -0.23
SIK3-209ENST00000480222 PLEKHA5Q9HAU0 1116 aa13.64□□□□□ -0.23
SIK3-209ENST00000480222 PLCB1Q9NQ66 1216 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms