RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 CYP26A1O43174 497 aa22.14■■□□□ 1.13
COL13A1-208ENST00000479733 GM2AP17900 193 aa22.14■■□□□ 1.13
COL13A1-208ENST00000479733 CTCFP49711 727 aaPredicted RBP22.14■■□□□ 1.13
COL13A1-208ENST00000479733 SETDB1Q15047 1291 aa22.14■■□□□ 1.13
COL13A1-208ENST00000479733 CYP1B1Q16678 543 aa22.14■■□□□ 1.13
COL13A1-208ENST00000479733 PTF1AQ7RTS3 328 aa22.14■■□□□ 1.13
COL13A1-208ENST00000479733 ZNF653Q96CK0 615 aa22.14■■□□□ 1.13
COL13A1-208ENST00000479733 NINJ2Q9NZG7 142 aa22.14■■□□□ 1.13
COL13A1-208ENST00000479733 NARFQ9UHQ1 456 aa22.14■■□□□ 1.13
COL13A1-208ENST00000479733 SPATA31A1Q5TZJ5 1347 aa22.14■■□□□ 1.13
COL13A1-208ENST00000479733 RASA4BC9J798 803 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 RASA4O43374 803 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 GAP43P17677 238 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 GTF2IP78347 998 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 ZNF568Q3ZCX4 644 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 HP1BP3Q5SSJ5 553 aaPredicted RBP22.13■■□□□ 1.13
COL13A1-208ENST00000479733 ZNF720Q7Z2F6 126 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 NOP9Q86U38 636 aaKnown RBP22.13■■□□□ 1.13
COL13A1-208ENST00000479733 SLC47A2Q86VL8 602 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 LMO3Q8TAP4 145 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 CD101Q93033 1021 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 MBOAT7Q96N66 472 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 NUDCD1Q96RS6 583 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 ANAPC5Q9UJX4 755 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 VAV3Q9UKW4 847 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 KIF3CO14782 793 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 LUC7L3O95232 432 aaKnown RBP22.13■■□□□ 1.13
COL13A1-208ENST00000479733 SHMT1P34896 483 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 TBC1D10BQ4KMP7 808 aaPredicted RBP22.13■■□□□ 1.13
COL13A1-208ENST00000479733 AMIGO3Q86WK7 504 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 HEMGNQ9BXL5 484 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 KIAA1683Q9H0B3 1180 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 TXLNGQ9NUQ3 528 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 KIF13BQ9NQT8 1826 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 CBX6O95503 412 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 CALCAP01258 141 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 ATP4AP20648 1035 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 SESN3P58005 492 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 PPP3CAQ08209 521 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 DAB2IPQ5VWQ8 1189 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 RNF43Q68DV7 783 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 CAPN12Q6ZSI9 719 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 TTC8Q8TAM2 541 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 RNPEPL1Q9HAU8 725 aa22.13■■□□□ 1.13
COL13A1-208ENST00000479733 EPHB2P29323 1055 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 WDR4P57081 412 aaKnown RBP22.12■■□□□ 1.13
COL13A1-208ENST00000479733 UBXN2AP68543 259 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 STRN3Q13033 797 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 C1orf186Q6ZWK4 172 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 TRMT1LQ7Z2T5 733 aaKnown RBP22.12■■□□□ 1.13
COL13A1-208ENST00000479733 SNF8Q96H20 258 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 LRRC37BQ96QE4 947 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 WHRNQ9P202 907 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 CHKBQ9Y259 395 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 EIF3DO15371 548 aaKnown RBP eCLIP22.12■■□□□ 1.13
COL13A1-208ENST00000479733 TUBP50607 506 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 SCNN1DP51172 638 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 HADHBP55084 474 aaKnown RBP22.12■■□□□ 1.13
COL13A1-208ENST00000479733 GRIPAP1Q4V328 841 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 ANO7Q6IWH7 933 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 LONP2Q86WA8 852 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 PPM1KQ8N3J5 372 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 FAM13CQ8NE31 585 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 ZSWIM2Q8NEG5 633 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 MKNK1Q9BUB5 465 aa22.12■■□□□ 1.13
COL13A1-208ENST00000479733 A6NHS1 94 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 PEX11AO75192 247 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 ENTPD5O75356 428 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 ITIH2P19823 946 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 CALB2P22676 271 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 IL9RQ01113 521 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 HERPUD2Q9BSE4 406 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 LRRC19Q9H756 370 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 SLITRK3O94933 977 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 ATF2P15336 505 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 Q4G0T1 1027 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 RHBDF2Q6PJF5 856 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 SLF2Q8IX21 1173 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 FAM20AQ96MK3 541 aa22.11■■□□□ 1.13
COL13A1-208ENST00000479733 SPDYE5A6NIY4 337 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 AP1G2O75843 785 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 GNAZP19086 355 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 INHBEP58166 350 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 C11orf91Q3C1V1 193 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 SLFN13Q68D06 897 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 SUPT20HQ8NEM7 779 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 CRYGNQ8WXF5 182 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 PHTF1Q9UMS5 762 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 GOLGB1Q14789 3259 aaKnown RBP22.1■■□□□ 1.13
COL13A1-208ENST00000479733 C6orf229H3BNL8 230 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 MKRN3Q13064 507 aaKnown RBP22.1■■□□□ 1.13
COL13A1-208ENST00000479733 TMEM63BQ5T3F8 832 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 EPS8L1Q8TE68 723 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 FIZ1Q96SL8 496 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 TBC1D10AQ9BXI6 508 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 GLT8D2Q9H1C3 349 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 DMAC2Q9NW81 257 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 R3HDM2Q9Y2K5 976 aaKnown RBP22.1■■□□□ 1.13
COL13A1-208ENST00000479733 PLIN4Q96Q06 1357 aa22.1■■□□□ 1.13
COL13A1-208ENST00000479733 RIMBP2O15034 1052 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms