RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 INPP5FQ9Y2H2 1132 aa6.92□□□□□ -1.3
SF3B1-209ENST00000479532 SAMM50Q9Y512 469 aa6.92□□□□□ -1.3
SF3B1-209ENST00000479532 SYNRGQ9UMZ2 1314 aa6.92□□□□□ -1.3
SF3B1-209ENST00000479532 DOCK5Q9H7D0 1870 aa6.92□□□□□ -1.3
SF3B1-209ENST00000479532 CCDC85CA6NKD9 419 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 WDR64B1ANS9 1081 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 DDX39AO00148 427 aaKnown RBP6.91□□□□□ -1.3
SF3B1-209ENST00000479532 DNM1LO00429 736 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 MSH4O15457 936 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 SLC37A4O43826 429 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 DKC1O60832 514 aaKnown RBP eCLIP6.91□□□□□ -1.3
SF3B1-209ENST00000479532 CABYRO75952 493 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 FARP2O94887 1054 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-209ENST00000479532 ARIH2O95376 493 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 PGK1P00558 417 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 CELA3AP09093 270 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 OR52Z1P0C646 297 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 ARP10275 920 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 KCNA2P16389 499 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 CST5P28325 142 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-209ENST00000479532 SFNP31947 248 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 JAK3P52333 1124 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 SP4Q02446 784 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 ARHGAP1Q07960 439 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 FAAP100Q0VG06 881 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 FSCN1Q16658 493 aaKnown RBP6.91□□□□□ -1.3
SF3B1-209ENST00000479532 DGKDQ16760 1214 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 FAM160B1Q5W0V3 765 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 ZNF746Q6NUN9 644 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-209ENST00000479532 WFDC8Q8IUA0 241 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 RDM1Q8NG50 284 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 CYP2W1Q8TAV3 490 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 SEPT1Q8WYJ6 367 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 ABHD8Q96I13 439 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 RSRP1Q9BUV0 290 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 KATNAL1Q9BW62 490 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 CEP44Q9C0F1 390 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 SMG9Q9H0W8 520 aaKnown RBP6.91□□□□□ -1.3
SF3B1-209ENST00000479532 AZI2Q9H6S1 392 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 GRPEL1Q9HAV7 217 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 ZNF215Q9UL58 517 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-209ENST00000479532 OGDHLQ9ULD0 1010 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 PCDHA12Q9UN75 941 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 RAXQ9Y2V3 346 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 ELP1O95163 1332 aa6.91□□□□□ -1.3
SF3B1-209ENST00000479532 CLGNO14967 610 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 CHMP2AO43633 222 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 ATP9AO75110 1047 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 PPFIA4O75335 1185 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 ALX3O95076 343 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 MMP3P08254 477 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 MYL3P08590 195 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 GBP2P32456 591 aaPredicted RBP6.9□□□□□ -1.3
SF3B1-209ENST00000479532 PRPHP41219 470 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 ACTR2P61160 394 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 NKX3-2P78367 333 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 KRT85P78386 507 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 SP2Q02086 613 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 PWP1Q13610 501 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 STK38Q15208 465 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 LRRC41Q15345 812 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 RPS26P11Q5JNZ5 115 aaPredicted RBP6.9□□□□□ -1.3
SF3B1-209ENST00000479532 GJC2Q5T442 439 aaPredicted RBP6.9□□□□□ -1.3
SF3B1-209ENST00000479532 ARL6IP4Q66PJ3 421 aaKnown RBP6.9□□□□□ -1.3
SF3B1-209ENST00000479532 ADAMTSL4Q6UY14 1074 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 MIER3Q7Z3K6 550 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 RELL1Q8IUW5 271 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 SLC43A3Q8NBI5 491 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 ERMNQ8TAM6 284 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 ETNPPLQ8TBG4 499 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 NEK9Q8TD19 979 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 AFG1LQ8WV93 481 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 BSNDQ8WZ55 320 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 COPS5Q92905 334 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 SLC5A5Q92911 643 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 LENG9Q96B70 501 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 GLT1D1Q96MS3 346 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 NECAB3Q96P71 396 aaPredicted RBP6.9□□□□□ -1.3
SF3B1-209ENST00000479532 LPIN3Q9BQK8 851 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 SEZ6LQ9BYH1 1024 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 LACRTQ9GZZ8 138 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 SMARCAD1Q9H4L7 1026 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 TTC12Q9H892 705 aaPredicted RBP6.9□□□□□ -1.3
SF3B1-209ENST00000479532 KCNMB3Q9NPA1 279 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 CHMP5Q9NZZ3 219 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 GPN3Q9UHW5 284 aaPredicted RBP6.9□□□□□ -1.3
SF3B1-209ENST00000479532 ADGRE2Q9UHX3 823 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 TRIM33Q9UPN9 1127 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 PCDHB6Q9Y5E3 794 aa6.9□□□□□ -1.3
SF3B1-209ENST00000479532 ENC1O14682 589 aa6.89□□□□□ -1.31
SF3B1-209ENST00000479532 ADCY6O43306 1168 aa6.89□□□□□ -1.31
SF3B1-209ENST00000479532 PSMD10O75832 226 aa6.89□□□□□ -1.31
SF3B1-209ENST00000479532 YEATS4O95619 227 aa6.89□□□□□ -1.31
SF3B1-209ENST00000479532 ASGR1P07306 291 aa6.89□□□□□ -1.31
SF3B1-209ENST00000479532 GTF2F1P35269 517 aaKnown RBP eCLIP6.89□□□□□ -1.31
SF3B1-209ENST00000479532 TCF7P36402 384 aaPredicted RBP6.89□□□□□ -1.31
SF3B1-209ENST00000479532 SLC26A2P50443 739 aa6.89□□□□□ -1.31
SF3B1-209ENST00000479532 TOB1P50616 345 aaPredicted RBP6.89□□□□□ -1.31
SF3B1-209ENST00000479532 ATP2C1P98194 919 aaPredicted RBP6.89□□□□□ -1.31
SF3B1-209ENST00000479532 BEX3Q00994 111 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms