RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 RASAL2Q9UJF2 1139 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 ZBTB21Q9ULJ3 1066 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 DIS3Q9Y2L1 958 aaKnown RBP14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 FRMPD4Q14CM0 1322 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 GTPBP10A4D1E9 387 aaKnown RBP14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 SPDYE2BA6NHP3 402 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 SLC26A4O43511 780 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 SPDYE6P0CI01 402 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 PSMC2P35998 433 aaKnown RBP14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 PRELPP51888 382 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 SLC8A3P57103 927 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 ADCY1Q08828 1119 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 PPP2R5CQ13362 524 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 SEPT14Q6ZU15 432 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 FAM178BQ8IXR5 827 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 KLHL29Q96CT2 875 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 LXNQ9BS40 222 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 ARHGEF10LQ9HCE6 1279 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 CTTNBP2NLQ9P2B4 639 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 ZNF70Q9UC06 446 aaPredicted RBP14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 PCYOX1Q9UHG3 505 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 ANKRD62A6NC57 917 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 CTNNA2P26232 953 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 CHRNA3P32297 505 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 BNIP1Q12981 228 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 LDHDQ86WU2 507 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 ANKLE1Q8NAG6 615 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 ARHGEF2Q92974 986 aaKnown RBP14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 WDR11Q9BZH6 1224 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 AAASQ9NRG9 546 aa14.28□□□□□ -0.12
PDZRN3-208ENST00000479530 BRWD3Q6RI45 1802 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 CNTNAP1P78357 1384 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 HIP1RO75146 1068 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 UPP2O95045 317 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 VIL1P09327 827 aaKnown RBP14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 RARGP13631 454 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 COMTP21964 271 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 COPS2P61201 443 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 MGAT5Q09328 741 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 MESDQ14696 234 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 TNIP1Q15025 636 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 PPP2R5EQ16537 467 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 CCDC105Q8IYK2 499 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 SPDL1Q96EA4 605 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 ZSWIM1Q9BR11 485 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 NSRP1Q9H0G5 558 aaKnown RBP14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 INTS2Q9H0H0 1204 aaKnown RBP14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 CDC42EP4Q9H3Q1 356 aaKnown RBP14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 TUFT1Q9NNX1 390 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 ACP6Q9NPH0 428 aa14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 MTRF1LQ9UGC7 380 aaKnown RBP14.27□□□□□ -0.12
PDZRN3-208ENST00000479530 IPO5O00410 1097 aaKnown RBP14.27□□□□□ -0.13
PDZRN3-208ENST00000479530 NFIBO00712 420 aa14.27□□□□□ -0.13
PDZRN3-208ENST00000479530 FTLP02792 175 aaPredicted RBP14.27□□□□□ -0.13
PDZRN3-208ENST00000479530 PEX5P50542 639 aa14.27□□□□□ -0.13
PDZRN3-208ENST00000479530 STYK1Q6J9G0 422 aa14.27□□□□□ -0.13
PDZRN3-208ENST00000479530 CGB2Q6NT52 195 aa14.27□□□□□ -0.13
PDZRN3-208ENST00000479530 ART4Q93070 314 aa14.27□□□□□ -0.13
PDZRN3-208ENST00000479530 TMEM109Q9BVC6 243 aa14.27□□□□□ -0.13
PDZRN3-208ENST00000479530 RANBP17Q9H2T7 1088 aaKnown RBP14.27□□□□□ -0.13
PDZRN3-208ENST00000479530 ZNF277Q9NRM2 450 aaPredicted RBP14.27□□□□□ -0.13
PDZRN3-208ENST00000479530 DMAC2Q9NW81 257 aa14.27□□□□□ -0.13
PDZRN3-208ENST00000479530 NOP53Q9NZM5 478 aaKnown RBP14.27□□□□□ -0.13
PDZRN3-208ENST00000479530 SYNGAP1Q96PV0 1343 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 ALAS1P13196 640 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 GAP43P17677 238 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 CHKAP35790 457 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 SPP2Q13103 211 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 KAT5Q92993 513 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 PWWP2AQ96N64 755 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 SLC5A4Q9NY91 659 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 ADAM22Q9P0K1 906 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 APEX2Q9UBZ4 518 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 PLSCR1O15162 318 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 MFSD5Q6N075 450 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 FMNL3Q8IVF7 1028 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 KCNV2Q8TDN2 545 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 KCNK9Q9NPC2 374 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 ARHGEF3Q9NR81 526 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 HOMER2Q9NSB8 354 aa14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.26□□□□□ -0.13
PDZRN3-208ENST00000479530 PODXLO00592 558 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 COILP38432 576 aaPredicted RBP14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 MSH2P43246 934 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 ZNF131P52739 623 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 SIX1Q15475 284 aaPredicted RBP14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 ZNF568Q3ZCX4 644 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 B3GNT9Q6UX72 402 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 TAOK1Q7L7X3 1001 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 CYP4X1Q8N118 509 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 PLEKHO2Q8TD55 490 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 FAM84AQ96KN4 292 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 AGPAT1Q99943 283 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 CBWD1Q9BRT8 395 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 GPRC5CQ9NQ84 441 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 EIF3DO15371 548 aaKnown RBP eCLIP14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 EXOC3O60645 756 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 SUN1O94901 812 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 PPP3CAQ08209 521 aa14.25□□□□□ -0.13
PDZRN3-208ENST00000479530 SLC15A2Q16348 729 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms