RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 FAM111BQ6SJ93 734 aa5.76□□□□□ -1.49
SSR1-207ENST00000479485 CATIPQ7Z7H3 387 aa5.76□□□□□ -1.49
SSR1-207ENST00000479485 RHOT1Q8IXI2 618 aa5.76□□□□□ -1.49
SSR1-207ENST00000479485 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.76□□□□□ -1.49
SSR1-207ENST00000479485 HDAC10Q969S8 669 aa5.76□□□□□ -1.49
SSR1-207ENST00000479485 ZNF512Q96ME7 567 aaPredicted RBP5.76□□□□□ -1.49
SSR1-207ENST00000479485 NUP88Q99567 741 aaPredicted RBP5.76□□□□□ -1.49
SSR1-207ENST00000479485 C7orf25Q9BPX7 421 aa5.76□□□□□ -1.49
SSR1-207ENST00000479485 EPC1Q9H2F5 836 aa5.76□□□□□ -1.49
SSR1-207ENST00000479485 LDAHQ9H6V9 325 aa5.76□□□□□ -1.49
SSR1-207ENST00000479485 LANCL2Q9NS86 450 aa5.76□□□□□ -1.49
SSR1-207ENST00000479485 ZMYM3Q14202 1370 aa5.76□□□□□ -1.49
SSR1-207ENST00000479485 K7ESM1 405 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 APBA1Q02410 837 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 IL10RAQ13651 578 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 ICAM4Q14773 271 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 RRP12Q5JTH9 1297 aaKnown RBP5.75□□□□□ -1.49
SSR1-207ENST00000479485 FKBP15Q5T1M5 1219 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 POLNQ7Z5Q5 900 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 TPH2Q8IWU9 490 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 DNERQ8NFT8 737 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 CCHCR1Q8TD31 782 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 KAT5Q92993 513 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 CEP95Q96GE4 821 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 LOXL4Q96JB6 756 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 CAMKK2Q96RR4 588 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 SENP6Q9GZR1 1112 aaPredicted RBP5.75□□□□□ -1.49
SSR1-207ENST00000479485 SCAND2PQ9GZW5 306 aaPredicted RBP5.75□□□□□ -1.49
SSR1-207ENST00000479485 ST6GALNAC2Q9UJ37 374 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 PNMA8BQ9ULN7 279 aaPredicted RBP5.75□□□□□ -1.49
SSR1-207ENST00000479485 NOB1Q9ULX3 412 aaKnown RBP5.75□□□□□ -1.49
SSR1-207ENST00000479485 SH3BP1Q9Y3L3 701 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 PCDHA13Q9Y5I0 950 aa5.75□□□□□ -1.49
SSR1-207ENST00000479485 WNT10BO00744 389 aa5.74□□□□□ -1.49
SSR1-207ENST00000479485 TSPAN6O43657 245 aa5.74□□□□□ -1.49
SSR1-207ENST00000479485 DTNBO60941 627 aa5.74□□□□□ -1.49
SSR1-207ENST00000479485 RFPL1O75677 317 aa5.74□□□□□ -1.49
SSR1-207ENST00000479485 VCAM1P19320 739 aa5.74□□□□□ -1.49
SSR1-207ENST00000479485 COMTP21964 271 aa5.74□□□□□ -1.49
SSR1-207ENST00000479485 GUCY1A2P33402 732 aa5.74□□□□□ -1.49
SSR1-207ENST00000479485 FXR1P51114 621 aaKnown RBP eCLIP5.74□□□□□ -1.49
SSR1-207ENST00000479485 MRPL49Q13405 166 aaKnown RBP5.74□□□□□ -1.49
SSR1-207ENST00000479485 ZNF572Q7Z3I7 529 aaPredicted RBP5.74□□□□□ -1.49
SSR1-207ENST00000479485 CHPFQ8IZ52 775 aa5.74□□□□□ -1.49
SSR1-207ENST00000479485 D2HGDHQ8N465 521 aa5.74□□□□□ -1.49
SSR1-207ENST00000479485 Q8TCH9 128 aa5.74□□□□□ -1.49
SSR1-207ENST00000479485 TSR2Q969E8 191 aaKnown RBP5.74□□□□□ -1.49
SSR1-207ENST00000479485 GTPBP4Q9BZE4 634 aaKnown RBP5.74□□□□□ -1.49
SSR1-207ENST00000479485 MANSC1Q9H8J5 431 aa5.74□□□□□ -1.49
SSR1-207ENST00000479485 TDP1Q9NUW8 608 aa5.74□□□□□ -1.49
SSR1-207ENST00000479485 AJAP1Q9UKB5 411 aaPredicted RBP5.74□□□□□ -1.49
SSR1-207ENST00000479485 PRPF3O43395 683 aaKnown RBP5.73□□□□□ -1.49
SSR1-207ENST00000479485 GPR32O75388 356 aa5.73□□□□□ -1.49
SSR1-207ENST00000479485 PARNO95453 639 aaKnown RBP5.73□□□□□ -1.49
SSR1-207ENST00000479485 FPR1P21462 350 aa5.73□□□□□ -1.49
SSR1-207ENST00000479485 FLT3LGP49771 235 aa5.73□□□□□ -1.49
SSR1-207ENST00000479485 ELAVL1Q15717 326 aaKnown RBP5.73□□□□□ -1.49
SSR1-207ENST00000479485 MFSD14BQ5SR56 506 aa5.73□□□□□ -1.49
SSR1-207ENST00000479485 IFIT1BQ5T764 474 aaKnown RBP5.73□□□□□ -1.49
SSR1-207ENST00000479485 MFSD5Q6N075 450 aa5.73□□□□□ -1.49
SSR1-207ENST00000479485 PDZD4Q76G19 769 aaPredicted RBP5.73□□□□□ -1.49
SSR1-207ENST00000479485 ZGPATQ8N5A5 531 aaKnown RBP5.73□□□□□ -1.49
SSR1-207ENST00000479485 MB21D1Q8N884 522 aa5.73□□□□□ -1.49
SSR1-207ENST00000479485 LRGUKQ96M69 825 aa5.73□□□□□ -1.49
SSR1-207ENST00000479485 CD248Q9HCU0 757 aa5.73□□□□□ -1.49
SSR1-207ENST00000479485 TMEM140Q9NV12 185 aa5.73□□□□□ -1.49
SSR1-207ENST00000479485 CAPN14A8MX76 684 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 HOXA3O43365 443 aaPredicted RBP5.72□□□□□ -1.49
SSR1-207ENST00000479485 ZNF623O75123 536 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 AMY1AP04745 511 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 POU2F2P09086 479 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 ALOX15P16050 662 aaPredicted RBP5.72□□□□□ -1.49
SSR1-207ENST00000479485 GNAT2P19087 354 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 PDCP20941 246 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 TGM1P22735 817 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 AKAP5P24588 427 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 PCSK1P29120 753 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 CYP2C19P33261 490 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 ALDH1A3P47895 512 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 CDC42EP1Q00587 391 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 TARDBPQ13148 414 aaKnown RBP eCLIP5.72□□□□□ -1.49
SSR1-207ENST00000479485 SP140Q13342 867 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 ZNF267Q14586 743 aaPredicted RBP5.72□□□□□ -1.49
SSR1-207ENST00000479485 FAM102BQ5T8I3 360 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 AFMIDQ63HM1 303 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 ZNF585AQ6P3V2 769 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 USP45Q70EL2 814 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 XYLT1Q86Y38 959 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 FMNL3Q8IVF7 1028 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 ELOA2Q8IYF1 753 aaPredicted RBP5.72□□□□□ -1.49
SSR1-207ENST00000479485 ZNF808Q8N4W9 903 aaPredicted RBP5.72□□□□□ -1.49
SSR1-207ENST00000479485 STON2Q8WXE9 905 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 WWC2-AS2Q96NR7 200 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 SAMD11Q96NU1 681 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 MPHOSPH9Q99550 1183 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 KCNH6Q9H252 994 aa5.72□□□□□ -1.49
SSR1-207ENST00000479485 RSF1Q96T23 1441 aaPredicted RBP5.72□□□□□ -1.49
SSR1-207ENST00000479485 ATRNL1Q5VV63 1379 aa5.71□□□□□ -1.5
SSR1-207ENST00000479485 DHX57Q6P158 1386 aaKnown RBP5.71□□□□□ -1.5
SSR1-207ENST00000479485 SGTAO43765 313 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms