RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 ERVK-11Q9UQG0 969 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 MRPL11Q9Y3B7 192 aaKnown RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 RTCBQ9Y3I0 505 aaKnown RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 RABGAP1Q9Y3P9 1069 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 KDM6AO15550 1401 aaPredicted RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 DISP3Q9P2K9 1392 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 NFAT5O94916 1531 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 PHF20L1A8MW92 1017 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 TK2O00142 265 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 KRT10P13645 584 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 ARHGDIBP52566 201 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 RELQ04864 619 aaPredicted RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 PLS1Q14651 629 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 LPIN1Q14693 890 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 NONOQ15233 471 aaKnown RBP eCLIP11.13□□□□□ -0.63
NUP35-209ENST00000479162 CWF19L2Q2TBE0 894 aaKnown RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 CCDC58Q4VC31 144 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 SPDYAQ5MJ70 313 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 SHEQ5VZ18 495 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 ZNF704Q6ZNC4 412 aaPredicted RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 KIF2BQ8N4N8 673 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 TTLQ8NG68 377 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 DYDC2Q96IM9 177 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 NIFKQ9BYG3 293 aaKnown RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 MARCH7Q9H992 704 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 SLC12A6Q9UHW9 1150 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 SMIM23A6NLE4 172 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 F8W031 263 aaPredicted RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 FGF18O76093 207 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 UBOX5O94941 541 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 CDH3P22223 829 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 GTF2H1P32780 548 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 PTK2Q05397 1052 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 NFE2Q16621 373 aaPredicted RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 DBX2Q6ZNG2 339 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 RAVER1Q8IY67 606 aaKnown RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 DHX38Q92620 1227 aaKnown RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 LRRC59Q96AG4 307 aaKnown RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 SLC38A10Q9HBR0 1119 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 DDX18Q9NVP1 670 aaKnown RBP11.13□□□□□ -0.63
NUP35-209ENST00000479162 TRAF3IP3Q9Y228 551 aa11.13□□□□□ -0.63
NUP35-209ENST00000479162 MINK1Q8N4C8 1332 aaPredicted RBP11.12□□□□□ -0.63
NUP35-209ENST00000479162 PNMA6EA0A0J9YXQ4 647 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 ZNF233A6NK53 670 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 FADS2P1A8MWK0 482 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 FOXP2O15409 715 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 SDSP20132 328 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 ME1P48163 572 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 SF3B4Q15427 424 aaKnown RBP eCLIP11.12□□□□□ -0.636e-6■□□□□ 11
NUP35-209ENST00000479162 KCNJ8Q15842 424 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 RESP18Q5W5W9 173 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 DENND2CQ68D51 928 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 FCRLBQ6BAA4 426 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 FLAD1Q8NFF5 587 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 TMA16Q96EY4 203 aaKnown RBP11.12□□□□□ -0.63
NUP35-209ENST00000479162 RNF38Q9H0F5 515 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 PLGRKTQ9HBL7 147 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 SH2B1Q9NRF2 756 aaPredicted RBP11.12□□□□□ -0.63
NUP35-209ENST00000479162 SAMD15Q9P1V8 674 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 SOX13Q9UN79 622 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 TRIM33Q9UPN9 1127 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 ATP11BQ9Y2G3 1177 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 IFT52Q9Y366 437 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 GPSM3Q9Y4H4 160 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 CPDO75976 1380 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 PCDH11XQ9BZA7 1347 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 CARNS1A5YM72 827 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 RARBP10826 455 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 GJB2P29033 226 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 TRIM23P36406 574 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 CHRNEQ04844 493 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 TRIM28Q13263 835 aaKnown RBP11.12□□□□□ -0.63
NUP35-209ENST00000479162 PPP2R5CQ13362 524 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 BRDTQ58F21 947 aaPredicted RBP11.12□□□□□ -0.63
NUP35-209ENST00000479162 PPP6R3Q5H9R7 873 aaPredicted RBP11.12□□□□□ -0.63
NUP35-209ENST00000479162 TATDN1Q6P1N9 297 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 PEX26Q7Z412 305 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 IFT20Q8IY31 132 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 SCYL3Q8IZE3 742 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 CPSF7Q8N684 471 aaKnown RBP11.12□□□□□ -0.63
NUP35-209ENST00000479162 ENAHQ8N8S7 591 aaPredicted RBP11.12□□□□□ -0.63
NUP35-209ENST00000479162 ARRDC4Q8NCT1 418 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 PRPF31Q8WWY3 499 aaKnown RBP11.12□□□□□ -0.63
NUP35-209ENST00000479162 SGK3Q96BR1 496 aa11.12□□□□□ -0.63
NUP35-209ENST00000479162 SECISBP2Q96T21 854 aaKnown RBP11.12□□□□□ -0.63
NUP35-209ENST00000479162 DDX50Q9BQ39 737 aaKnown RBP11.12□□□□□ -0.63
NUP35-209ENST00000479162 ASCC2Q9H1I8 757 aaPredicted RBP11.12□□□□□ -0.63
NUP35-209ENST00000479162 TRNAU1APQ9NX07 287 aaKnown RBP11.12□□□□□ -0.63
NUP35-209ENST00000479162 CDK12Q9NYV4 1490 aaPredicted RBP11.11□□□□□ -0.63
NUP35-209ENST00000479162 PASKQ96RG2 1323 aa11.11□□□□□ -0.63
NUP35-209ENST00000479162 OVOS2A0A0J9YW53 1432 aa11.11□□□□□ -0.63
NUP35-209ENST00000479162 OVOS2Q6IE36 1432 aa11.11□□□□□ -0.63
NUP35-209ENST00000479162 H7C0C1 242 aa11.11□□□□□ -0.63
NUP35-209ENST00000479162 DKC1O60832 514 aaKnown RBP eCLIP11.11□□□□□ -0.63
NUP35-209ENST00000479162 OCM2P0CE71 109 aa11.11□□□□□ -0.63
NUP35-209ENST00000479162 OCMP0CE72 109 aaPredicted RBP11.11□□□□□ -0.63
NUP35-209ENST00000479162 ATF6P18850 670 aa11.11□□□□□ -0.63
NUP35-209ENST00000479162 CRABP2P29373 138 aa11.11□□□□□ -0.63
NUP35-209ENST00000479162 FXR1P51114 621 aaKnown RBP eCLIP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms