RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 LRRC10BA6NIK2 292 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 LRRIQ3A6PVS8 624 aaPredicted RBP14.27□□□□□ -0.13
CHD3-210ENST00000479080 KIAA0391O15091 583 aaKnown RBP14.27□□□□□ -0.13
CHD3-210ENST00000479080 MAPK13O15264 365 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 TRIM49P0CI25 452 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 TRIM49CP0CI26 452 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 STAG3L1P0CL83 205 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 CXCL8P10145 99 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 EEF1GP26641 437 aaKnown RBP14.27□□□□□ -0.13
CHD3-210ENST00000479080 COPB1P53618 953 aaKnown RBP14.27□□□□□ -0.13
CHD3-210ENST00000479080 TMEM132AQ24JP5 1023 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 UVSSAQ2YD98 709 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 DCAF4L1Q3SXM0 396 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 CCDC40Q4G0X9 1142 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 SARM1Q6SZW1 724 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 FRMD5Q7Z6J6 570 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 ZNF598Q86UK7 904 aaKnown RBP14.27□□□□□ -0.13
CHD3-210ENST00000479080 ADAM2Q99965 735 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 TCHPQ9BT92 498 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 TRAIPQ9BWF2 469 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 CHST12Q9NRB3 414 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 FAM105AQ9NUU6 356 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 RNF19AQ9NV58 838 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 SNTG2Q9NY99 539 aa14.27□□□□□ -0.13
CHD3-210ENST00000479080 COL4A6Q14031 1691 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 A0A1B0GTH6 734 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.26□□□□□ -0.13
CHD3-210ENST00000479080 C9IYK1 514 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 GOLGA6L19H0YKK7 550 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 TEX33O43247 280 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 EPB41P11171 864 aaKnown RBP14.26□□□□□ -0.13
CHD3-210ENST00000479080 CSF2RAP15509 400 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHD3-210ENST00000479080 EPHB4P54760 987 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 PPP3CAQ08209 521 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 BFSP1Q12934 665 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 PSMD6Q15008 389 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 SLC10A6Q3KNW5 377 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 LMBRD2Q68DH5 695 aaPredicted RBP14.26□□□□□ -0.13
CHD3-210ENST00000479080 C16orf59Q7L2K0 433 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 DEFB128Q7Z7B8 93 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 MRPL10Q7Z7H8 261 aaKnown RBP14.26□□□□□ -0.13
CHD3-210ENST00000479080 EFCAB13Q8IY85 973 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 CRIPAKQ8N1N5 446 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 PARD3BQ8TEW8 1205 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 ZNF516Q92618 1163 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 POP1Q99575 1024 aaKnown RBP14.26□□□□□ -0.13
CHD3-210ENST00000479080 PDE11AQ9HCR9 933 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 RGS18Q9NS28 235 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 PCDHB2Q9Y5E7 798 aa14.26□□□□□ -0.13
CHD3-210ENST00000479080 TTC26A0AVF1 554 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 RECQL4O94761 1208 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 LDHAP00338 332 aaKnown RBP14.25□□□□□ -0.13
CHD3-210ENST00000479080 AKAP5P24588 427 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 AFF1P51825 1210 aaKnown RBP14.25□□□□□ -0.13
CHD3-210ENST00000479080 CLDN10P78369 228 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 FAM189BP81408 668 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 SPAG1Q07617 926 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 MAN2A1Q16706 1144 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 TWF2Q6IBS0 349 aaKnown RBP14.25□□□□□ -0.13
CHD3-210ENST00000479080 MFSD5Q6N075 450 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 AGMOQ6ZNB7 445 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 OR5B17Q8NGF7 314 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 LPPQ93052 612 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 SNX27Q96L92 541 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 ADPGKQ9BRR6 497 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 TUBGCP2Q9BSJ2 902 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 VPS16Q9H269 839 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 TSPYL2Q9H2G4 693 aaPredicted RBP14.25□□□□□ -0.13
CHD3-210ENST00000479080 RBAKQ9NYW8 714 aaPredicted RBP14.25□□□□□ -0.13
CHD3-210ENST00000479080 IFNKQ9P0W0 207 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 ARMCX3Q9UH62 379 aaPredicted RBP14.25□□□□□ -0.13
CHD3-210ENST00000479080 FRMD4BQ9Y2L6 1034 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 ANK1P16157 1881 aa14.25□□□□□ -0.13
CHD3-210ENST00000479080 A0A0U1RQF3 1178 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 ZNF233A6NK53 670 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 LGALS16A8MUM7 142 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 LACTBL1A8MY62 500 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 ENPP3O14638 875 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 ZNF623O75123 536 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 LRRN2O75325 713 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 FGFR1OPO95684 399 aaKnown RBP14.24□□□□□ -0.13
CHD3-210ENST00000479080 GNA14O95837 355 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 CLTAP09496 248 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 RAG1P15918 1043 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 SYN1P17600 705 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 PBX1P40424 430 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 MTIF2P46199 727 aaKnown RBP14.24□□□□□ -0.13
CHD3-210ENST00000479080 VAMP7P51809 220 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 CBWD6Q4V339 395 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 XKR4Q5GH76 650 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 CBWD3Q5JTY5 395 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 CBWD5Q5RIA9 395 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 DPY19L2P1Q6NXN4 242 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 ALKAL1Q6UXT8 129 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 C15orf39Q6ZRI6 1047 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 INTS8Q75QN2 995 aaKnown RBP14.24□□□□□ -0.13
CHD3-210ENST00000479080 ECHDC2Q86YB7 292 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 FAM114A1Q8IWE2 563 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 GSTCDQ8NEC7 633 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms