RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 SRRTQ9BXP5 876 aaKnown RBP12.78□□□□□ -0.36
PDCD11-204ENST00000478543 MRPL4Q9BYD3 311 aaKnown RBP12.78□□□□□ -0.36
PDCD11-204ENST00000478543 PCIF1Q9H4Z3 704 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 FANCLQ9NW38 375 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 ANKFY1Q9P2R3 1169 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 TRAF3IP3Q9Y228 551 aa12.78□□□□□ -0.36
PDCD11-204ENST00000478543 NOC2LQ9Y3T9 749 aaKnown RBP12.78□□□□□ -0.36
PDCD11-204ENST00000478543 ZNF318Q5VUA4 2279 aa12.77□□□□□ -0.36
PDCD11-204ENST00000478543 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.77□□□□□ -0.37
PDCD11-204ENST00000478543 GOLGA6L3A6NEY3 463 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 IKBKBO14920 756 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 TSPAN1O60635 241 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 CAND2O75155 1236 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 PIGRP01833 764 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 GHRP10912 638 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 SFPQP23246 707 aaKnown RBP eCLIP12.77□□□□□ -0.37
PDCD11-204ENST00000478543 NR2F2P24468 414 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 BFSP2Q13515 415 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 FAM187BQ17R55 369 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 FAM26DQ5JW98 314 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 ATF7IP2Q5U623 682 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 EEF1DP3Q658K8 133 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 PPP4R3CPQ6ZMV5 832 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 ZBTB33Q86T24 672 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 FAM228AQ86W67 206 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 HERC6Q8IVU3 1022 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 RPUSD2Q8IZ73 545 aaKnown RBP12.77□□□□□ -0.37
PDCD11-204ENST00000478543 GJD3Q8N144 294 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 GOLGA5Q8TBA6 731 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 CAGE1Q8TC20 777 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 POMGNT1Q8WZA1 660 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 KCNN1Q92952 543 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 ACO2Q99798 780 aaKnown RBP12.77□□□□□ -0.37
PDCD11-204ENST00000478543 OSBPL7Q9BZF2 842 aa12.77□□□□□ -0.37
PDCD11-204ENST00000478543 SAMSN1Q9NSI8 373 aaKnown RBP12.77□□□□□ -0.37
PDCD11-204ENST00000478543 GOLGA8IPA6NC78 632 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 GOLGA8JA6NMD2 632 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 RPS6KA5O75582 802 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 SELPP16109 830 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 ARF4P18085 180 aaPredicted RBP12.76□□□□□ -0.37
PDCD11-204ENST00000478543 TPM4P67936 248 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 FKBP3Q00688 224 aaKnown RBP12.76□□□□□ -0.37
PDCD11-204ENST00000478543 ADAM9Q13443 819 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 GSE1Q14687 1217 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 EDRF1Q3B7T1 1238 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 FBXO47Q5MNV8 452 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 CEP135Q66GS9 1140 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 ZPBP2Q6X784 338 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 LRRC55Q6ZSA7 311 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 LRRC8DQ7L1W4 858 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 CREBRFQ8IUR6 639 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 ZSWIM2Q8NEG5 633 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 SAAL1Q96ER3 474 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 PRIMPOLQ96LW4 560 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 TCHPQ9BT92 498 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 UBE2ZQ9H832 354 aaPredicted RBP12.76□□□□□ -0.37
PDCD11-204ENST00000478543 HSPBP1Q9NZL4 362 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 CGNQ9P2M7 1197 aaKnown RBP12.76□□□□□ -0.37
PDCD11-204ENST00000478543 CNTNAP2Q9UHC6 1331 aa12.76□□□□□ -0.37
PDCD11-204ENST00000478543 TULP1O00294 542 aaPredicted RBP12.75□□□□□ -0.37
PDCD11-204ENST00000478543 CETN3O15182 167 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 TOM1L1O75674 476 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 RPL13P26373 211 aaKnown RBP12.75□□□□□ -0.37
PDCD11-204ENST00000478543 ADSSP30520 456 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 CD52P31358 61 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 CASP4P49662 377 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 SNRPFP62306 86 aaKnown RBP12.75□□□□□ -0.37
PDCD11-204ENST00000478543 RBL2Q08999 1139 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 NFX1Q12986 1120 aaKnown RBP12.75□□□□□ -0.37
PDCD11-204ENST00000478543 PAK2Q13177 524 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 LPIN1Q14693 890 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 GPNMBQ14956 572 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 TCTN1Q2MV58 587 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 ZNF568Q3ZCX4 644 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 CCDC40Q4G0X9 1142 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 TRAF7Q6Q0C0 670 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 MPZL3Q6UWV2 235 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 TSHZ1Q6ZSZ6 1077 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 CNOT6LQ96LI5 555 aaKnown RBP12.75□□□□□ -0.37
PDCD11-204ENST00000478543 SLC9A7Q96T83 725 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 MSTO1Q9BUK6 570 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 HAPLN2Q9GZV7 340 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 HSD3B7Q9H2F3 369 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 THAP9Q9H5L6 903 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 PDZD7Q9H5P4 517 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 AGO3Q9H9G7 860 aaKnown RBP12.75□□□□□ -0.37
PDCD11-204ENST00000478543 ST3GAL5Q9UNP4 418 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 PIN4Q9Y237 131 aaKnown RBP12.75□□□□□ -0.37
PDCD11-204ENST00000478543 TNFSF13BQ9Y275 285 aa12.75□□□□□ -0.37
PDCD11-204ENST00000478543 FSD2A1L4K1 749 aa12.74□□□□□ -0.37
PDCD11-204ENST00000478543 KCNJ18B7U540 433 aa12.74□□□□□ -0.37
PDCD11-204ENST00000478543 ABLIM1O14639 778 aa12.74□□□□□ -0.37
PDCD11-204ENST00000478543 N4BP3O15049 544 aa12.74□□□□□ -0.37
PDCD11-204ENST00000478543 CLDN3O15551 220 aa12.74□□□□□ -0.37
PDCD11-204ENST00000478543 EXOC3O60645 756 aa12.74□□□□□ -0.37
PDCD11-204ENST00000478543 NPTXRO95502 500 aa12.74□□□□□ -0.37
PDCD11-204ENST00000478543 FGFR1OPO95684 399 aaKnown RBP12.74□□□□□ -0.37
PDCD11-204ENST00000478543 ATP1A3P13637 1013 aa12.74□□□□□ -0.37
PDCD11-204ENST00000478543 CDK11BP21127 795 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms