RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 DLATP10515 647 aaKnown RBP10.5□□□□□ -0.73
COL13A1-207ENST00000478219 VPS41P49754 854 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 RASSF2P50749 326 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 IL9RQ01113 521 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 OVGP1Q12889 678 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 THOC5Q13769 683 aaKnown RBP10.5□□□□□ -0.73
COL13A1-207ENST00000478219 SLC1A5Q15758 541 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 VPS36Q86VN1 386 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 RIBC1Q8N443 379 aaPredicted RBP10.5□□□□□ -0.73
COL13A1-207ENST00000478219 SLC44A5Q8NCS7 719 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 ATG4AQ8WYN0 398 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 GPR88Q9GZN0 384 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 EURLQ9NYK6 297 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 BCS1LQ9Y276 419 aa10.5□□□□□ -0.73
COL13A1-207ENST00000478219 DIS3Q9Y2L1 958 aaKnown RBP10.5□□□□□ -0.73
COL13A1-207ENST00000478219 CFAP69A5D8W1 941 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 KLRF2D3W0D1 207 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 MAGEB2O15479 319 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 ATMINO43313 823 aaPredicted RBP10.49□□□□□ -0.73
COL13A1-207ENST00000478219 THAP12O43422 761 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 LMNAP02545 664 aaKnown RBP10.49□□□□□ -0.73
COL13A1-207ENST00000478219 XRCC5P13010 732 aaKnown RBP10.49□□□□□ -0.73
COL13A1-207ENST00000478219 COMTP21964 271 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 IVDP26440 423 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 RPA3P35244 121 aaPredicted RBP10.49□□□□□ -0.73
COL13A1-207ENST00000478219 KCNA1Q09470 495 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 CALCOCO2Q13137 446 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 KRT79Q5XKE5 535 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 IZUMO2Q6UXV1 221 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 C4orf33Q8N1A6 199 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 RFWD2Q8NHY2 731 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 DENND1AQ8TEH3 1009 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 SLC35C1Q96A29 364 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 AGBL1Q96MI9 1066 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 ZSWIM1Q9BR11 485 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 YIPF2Q9BWQ6 316 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 VCX3BQ9H321 246 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 DNAJC18Q9H819 358 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 VCX3AQ9NNX9 186 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 TMCO1Q9UM00 188 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 CHMP2BQ9UQN3 213 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 TBC1D30Q9Y2I9 924 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 C2orf71A6NGG8 1288 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 UBAP1LF5GYI3 381 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 MAP3K7O43318 606 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 USP1O94782 785 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 ATF3P18847 181 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 FUT4P22083 530 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 GCAP28676 217 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 ITGA8P53708 1063 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 KRT17Q04695 432 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 MTA1Q13330 715 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 DRAP1Q14919 205 aaPredicted RBP10.49□□□□□ -0.73
COL13A1-207ENST00000478219 P3H1Q32P28 736 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 DUS1LQ6P1R4 473 aaKnown RBP10.49□□□□□ -0.73
COL13A1-207ENST00000478219 CYFIP1Q7L576 1253 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 TRIM42Q8IWZ5 723 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 SCYL3Q8IZE3 742 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 FBXO27Q8NI29 283 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 SLC20A1Q8WUM9 679 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 MAML1Q92585 1016 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 NMD3Q96D46 503 aaKnown RBP10.49□□□□□ -0.73
COL13A1-207ENST00000478219 HIC2Q96JB3 615 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 C12orf65Q9H3J6 166 aaKnown RBP10.49□□□□□ -0.73
COL13A1-207ENST00000478219 CYLDQ9NQC7 956 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 FBXO6Q9NRD1 293 aaPredicted RBP10.49□□□□□ -0.73
COL13A1-207ENST00000478219 STX18Q9P2W9 335 aaKnown RBP10.49□□□□□ -0.73
COL13A1-207ENST00000478219 SYNGAP1Q96PV0 1343 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 PASKQ96RG2 1323 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 LRP5O75197 1615 aa10.49□□□□□ -0.73
COL13A1-207ENST00000478219 PALM3A6NDB9 673 aaPredicted RBP10.48□□□□□ -0.73
COL13A1-207ENST00000478219 CLIC2O15247 247 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 ATP5DP30049 168 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 STAT1P42224 750 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 CHRNDQ07001 517 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 MESDQ14696 234 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 ARSHQ5FYA8 562 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 OLFML2BQ68BL8 750 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 USP17L2Q6R6M4 530 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 PPP1R21Q6ZMI0 780 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 SLC13A5Q86YT5 568 aaPredicted RBP10.48□□□□□ -0.73
COL13A1-207ENST00000478219 SHKBP1Q8TBC3 707 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 MRRFQ96E11 262 aaKnown RBP10.48□□□□□ -0.73
COL13A1-207ENST00000478219 PTCD3Q96EY7 689 aaKnown RBP10.48□□□□□ -0.73
COL13A1-207ENST00000478219 BTBD10Q9BSF8 475 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 KCNQ5Q9NR82 932 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 CHST7Q9NS84 486 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 DDX43Q9NXZ2 648 aaKnown RBP10.48□□□□□ -0.73
COL13A1-207ENST00000478219 ASIC3Q9UHC3 531 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 LGALS13Q9UHV8 139 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 STX8Q9UNK0 236 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 KIAA1024Q9UPX6 916 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.48□□□□□ -0.73
COL13A1-207ENST00000478219 A0A1W2PRG0 241 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 POTEB3A0JP26 581 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 POTECB2RU33 542 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 PFDN1O60925 122 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 ASLP04424 464 aa10.48□□□□□ -0.73
COL13A1-207ENST00000478219 PCP11498 1178 aaKnown RBP10.48□□□□□ -0.73
COL13A1-207ENST00000478219 ABCD1P33897 745 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms