RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 ABCD1P33897 745 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 SLC27A1Q6PCB7 646 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 ZPBP2Q6X784 338 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 SLC24A5Q71RS6 500 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 SYCP3Q8IZU3 236 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 CEP120Q8N960 986 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 CDT1Q9H211 546 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 KCTD10Q9H3F6 313 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 TMEM206Q9H813 350 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 FAM105AQ9NUU6 356 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 EXOC7Q9UPT5 735 aa12.54□□□□□ -0.4
CBWD3-206ENST00000478048 UBE4BO95155 1302 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 A0A0U1RQF3 1178 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 MEIS3P2A8K0S8 358 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 ATF7P17544 494 aaPredicted RBP12.53□□□□□ -0.4
CBWD3-206ENST00000478048 GGCXP38435 758 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 KNOP1Q1ED39 458 aaKnown RBP12.53□□□□□ -0.4
CBWD3-206ENST00000478048 ZNF568Q3ZCX4 644 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 RASIP1Q5U651 963 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 MPZL3Q6UWV2 235 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 ECHDC2Q86YB7 292 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 GUF1Q8N442 669 aaKnown RBP12.53□□□□□ -0.4
CBWD3-206ENST00000478048 SMG8Q8ND04 991 aaKnown RBP12.53□□□□□ -0.4
CBWD3-206ENST00000478048 CCDC51Q96ER9 411 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 TCHPQ9BT92 498 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 TRAIPQ9BWF2 469 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 GBP3Q9H0R5 595 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 C1orf112Q9NSG2 853 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 IPPQ9Y573 584 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 PCDHB2Q9Y5E7 798 aa12.53□□□□□ -0.4
CBWD3-206ENST00000478048 CLDN3O15551 220 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 GFRA3O60609 400 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 UPP2O95045 317 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 MLLT3P42568 568 aaPredicted RBP12.52□□□□□ -0.41
CBWD3-206ENST00000478048 MATR3P43243 847 aaKnown RBP eCLIP12.52□□□□□ -0.41
CBWD3-206ENST00000478048 FAM189BP81408 668 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 MCL1Q07820 350 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 SKOR2Q2VWA4 1001 aaPredicted RBP12.52□□□□□ -0.41
CBWD3-206ENST00000478048 SEZ6Q53EL9 994 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 ZBTB41Q5SVQ8 909 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 TMEM192Q8IY95 271 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 ADSSL1Q8N142 457 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 CRIPAKQ8N1N5 446 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 TRIML1Q8N9V2 468 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 RNF169Q8NCN4 708 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 ZSWIM2Q8NEG5 633 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 KCNV2Q8TDN2 545 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 LPPQ93052 612 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 ADPGKQ9BRR6 497 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 CBWD1Q9BRT8 395 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 TRIM6Q9C030 488 aaPredicted RBP12.52□□□□□ -0.41
CBWD3-206ENST00000478048 PRO3102Q9H379 93 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 SEMA6BQ9H3T3 888 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 NXF3Q9H4D5 531 aaKnown RBP12.52□□□□□ -0.41
CBWD3-206ENST00000478048 STYXL1Q9Y6J8 313 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 TRIP11Q15643 1979 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 TRIOBPQ9H2D6 2365 aa12.52□□□□□ -0.41
CBWD3-206ENST00000478048 A0A0B4J269 797 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 CLIC2O15247 247 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 EFCAB14O75071 495 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 BMP8BP34820 402 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 KCNJ6P48051 423 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 OSTNP61366 133 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 NOLC1Q14978 699 aaKnown RBP eCLIP12.51□□□□□ -0.41
CBWD3-206ENST00000478048 DPCR1Q3MIW9 517 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 COBLL1Q53SF7 1204 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 KLHL10Q6JEL2 608 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 FAM117BQ6P1L5 589 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 ZNF598Q86UK7 904 aaKnown RBP12.51□□□□□ -0.41
CBWD3-206ENST00000478048 THNSL1Q8IYQ7 743 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 POMGNT1Q8WZA1 660 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 TOP1MTQ969P6 601 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 SYAP1Q96A49 352 aaPredicted RBP12.51□□□□□ -0.41
CBWD3-206ENST00000478048 RNPC3Q96LT9 517 aaKnown RBP12.51□□□□□ -0.41
CBWD3-206ENST00000478048 APOL6Q9BWW8 343 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 PCIF1Q9H4Z3 704 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 AGPAT3Q9NRZ7 376 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 TRIM49BA6NDI0 452 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 FAM189A1O60320 539 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 ZNF623O75123 536 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 AMHP03971 560 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 MCF2P10911 925 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 FGFR1P11362 822 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 AKAP5P24588 427 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 TNFSF9P41273 254 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 GATMP50440 423 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 PMS1P54277 932 aaKnown RBP12.51□□□□□ -0.41
CBWD3-206ENST00000478048 NLRP12P59046 1061 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 DCAF4L1Q3SXM0 396 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 FAM109BQ6ICB4 259 aaPredicted RBP12.51□□□□□ -0.41
CBWD3-206ENST00000478048 ARMCX5Q6P1M9 558 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 AGMOQ6ZNB7 445 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 MRPL10Q7Z7H8 261 aaKnown RBP12.51□□□□□ -0.41
CBWD3-206ENST00000478048 SAAL1Q96ER3 474 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 CXCL16Q9H2A7 254 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 RNF19AQ9NV58 838 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 TYW1Q9NV66 732 aaKnown RBP12.51□□□□□ -0.41
CBWD3-206ENST00000478048 SNTG2Q9NY99 539 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 SLC4A7Q9Y6M7 1214 aa12.51□□□□□ -0.41
CBWD3-206ENST00000478048 CITO14578 2027 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms