RNA–Protein interactions for RNA: ENST00000478027.2

RPSA-207, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 1,227 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-207ENST00000478027 OLFML3Q9NRN5 406 aa12.64□□□□□ -0.39
RPSA-207ENST00000478027 DNAJB4Q9UDY4 337 aa12.64□□□□□ -0.39
RPSA-207ENST00000478027 PUF60Q9UHX1 559 aaKnown RBP12.64□□□□□ -0.39
RPSA-207ENST00000478027 TBX20Q9UMR3 447 aa12.64□□□□□ -0.39
RPSA-207ENST00000478027 POLR2DO15514 142 aaKnown RBP12.63□□□□□ -0.39
RPSA-207ENST00000478027 RECQL4O94761 1208 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 GALTP07902 379 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 NMT1P30419 496 aaKnown RBP12.63□□□□□ -0.39
RPSA-207ENST00000478027 GRM5P41594 1212 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 SLC11A1P49279 550 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 SCNN1GP51170 649 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 AMPD3Q01432 767 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 PDE12Q6L8Q7 609 aaKnown RBP12.63□□□□□ -0.39
RPSA-207ENST00000478027 ZNF720Q7Z2F6 126 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 MAP4K3Q8IVH8 894 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 COLGALT2Q8IYK4 626 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 HVCN1Q96D96 273 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 IGSF21Q96ID5 467 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 RPS6KC1Q96S38 1066 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 TCHPQ9BT92 498 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 TRIM9Q9C026 710 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 MIOSQ9NXC5 875 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 SNTG2Q9NY99 539 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 KCNH3Q9ULD8 1083 aa12.63□□□□□ -0.39
RPSA-207ENST00000478027 NT5C1B-RDH14C9J2C7 533 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 FSCN2O14926 492 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 HNRNPDLO14979 420 aaKnown RBP12.62□□□□□ -0.39
RPSA-207ENST00000478027 CLDN3O15551 220 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 PPP1R37O75864 691 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 ALDH2P05091 517 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 IDEP14735 1019 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 IRS1P35568 1242 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 MCL1Q07820 350 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 NOLC1Q14978 699 aaKnown RBP eCLIP12.62□□□□□ -0.39not detected■■■□□ 15.2
RPSA-207ENST00000478027 COL19A1Q14993 1142 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 SKIV2LQ15477 1246 aaKnown RBP12.62□□□□□ -0.39
RPSA-207ENST00000478027 TCEAL5Q5H9L2 206 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 ZBTB33Q86T24 672 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 TMEM173Q86WV6 379 aaPredicted RBP12.62□□□□□ -0.39
RPSA-207ENST00000478027 STAMQ92783 540 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 PPP2R3CQ969Q6 453 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 BICD1Q96G01 975 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 TMEM169Q96HH4 297 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 CCDC94Q9BW85 323 aaPredicted RBP12.62□□□□□ -0.39
RPSA-207ENST00000478027 STRA6Q9BX79 667 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 MRPL44Q9H9J2 332 aaKnown RBP12.62□□□□□ -0.39
RPSA-207ENST00000478027 TOPORSQ9NS56 1045 aaPredicted RBP12.62□□□□□ -0.39
RPSA-207ENST00000478027 PANK4Q9NVE7 773 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 KLK14Q9P0G3 267 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 ANKFY1Q9P2R3 1169 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 THEGQ9P2T0 379 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 STK39Q9UEW8 545 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 COG5Q9UP83 839 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 FAN1Q9Y2M0 1017 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 GDAQ9Y2T3 454 aa12.62□□□□□ -0.39
RPSA-207ENST00000478027 FAM237AA0A1B0GTK4 181 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 A0A1W2PQ27 194 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 A0A1W2PQ64 194 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 A0A1W2PQD8 194 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 PTGESO14684 152 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 NRP1O14786 923 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 NCK2O43639 380 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 THP07101 528 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 SLFN14P0C7P3 912 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 PFKFB1P16118 471 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 LIG4P49917 911 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 YARSP54577 528 aaKnown RBP12.61□□□□□ -0.39
RPSA-207ENST00000478027 ERVFC1P60507 584 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 TUSC3Q13454 348 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 ALCAMQ13740 583 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 ZC2HC1CQ53FD0 456 aaPredicted RBP12.61□□□□□ -0.39
RPSA-207ENST00000478027 XKR4Q5GH76 650 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 HERC4Q5GLZ8 1057 aaPredicted RBP12.61□□□□□ -0.39
RPSA-207ENST00000478027 ALKAL1Q6UXT8 129 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 DDX53Q86TM3 631 aaKnown RBP12.61□□□□□ -0.39
RPSA-207ENST00000478027 CCDC65Q8IXS2 484 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 CEP120Q8N960 986 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 BCL7CQ8WUZ0 217 aaPredicted RBP12.61□□□□□ -0.39
RPSA-207ENST00000478027 HLA-CQ95604 372 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 ZBTB45Q96K62 511 aaPredicted RBP12.61□□□□□ -0.39
RPSA-207ENST00000478027 ACAP3Q96P50 834 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 C7orf25Q9BPX7 421 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 NGRNQ9NPE2 291 aaKnown RBP12.61□□□□□ -0.39
RPSA-207ENST00000478027 PRDM6Q9NQX0 595 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 USP25Q9UHP3 1055 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 HPSEQ9Y251 543 aa12.61□□□□□ -0.39
RPSA-207ENST00000478027 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.6□□□□□ -0.39
RPSA-207ENST00000478027 A0A1B0GVL5 298 aa12.6□□□□□ -0.39
RPSA-207ENST00000478027 ACTN4O43707 911 aaKnown RBP12.6□□□□□ -0.39
RPSA-207ENST00000478027 NR1I2O75469 434 aa12.6□□□□□ -0.39
RPSA-207ENST00000478027 EFEMP2O95967 443 aa12.6□□□□□ -0.39
RPSA-207ENST00000478027 ANP32AP39687 249 aaKnown RBP12.6□□□□□ -0.39
RPSA-207ENST00000478027 MATR3P43243 847 aaKnown RBP eCLIP12.6□□□□□ -0.39
RPSA-207ENST00000478027 ASIC1P78348 528 aa12.6□□□□□ -0.39
RPSA-207ENST00000478027 HYAL1Q12794 435 aa12.6□□□□□ -0.39
RPSA-207ENST00000478027 COASYQ13057 564 aa12.6□□□□□ -0.39
RPSA-207ENST00000478027 NAB2Q15742 525 aa12.6□□□□□ -0.39
RPSA-207ENST00000478027 KYAT1Q16773 422 aa12.6□□□□□ -0.39
RPSA-207ENST00000478027 SLC39A4Q6P5W5 647 aa12.6□□□□□ -0.39
RPSA-207ENST00000478027 ADGRD2Q7Z7M1 963 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms