RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 WDR18Q9BV38 432 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 TEKT3Q9BXF9 490 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 NSRP1Q9H0G5 558 aaKnown RBP10.44□□□□□ -0.74
CMC1-209ENST00000477739 UNC45AQ9H3U1 944 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 SAYSD1Q9NPB0 183 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 TRPC6Q9Y210 931 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 BZW2Q9Y6E2 419 aaKnown RBP10.44□□□□□ -0.74
CMC1-209ENST00000477739 NFIBO00712 420 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 ENTPD3O75355 529 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 HSPA9P38646 679 aaKnown RBP10.44□□□□□ -0.74
CMC1-209ENST00000477739 BFSP1Q12934 665 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 PPP2R5DQ14738 602 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 ANKRD20A8PQ5CZ79 823 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 TTC27Q6P3X3 843 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 HIPK4Q8NE63 616 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 TAS1R2Q8TE23 839 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 NSMCE1Q8WV22 266 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 METTL5Q9NRN9 209 aaKnown RBP10.44□□□□□ -0.74
CMC1-209ENST00000477739 AIPL1Q9NZN9 384 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 RNF14Q9UBS8 474 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 A0A0G2JND7 137 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 PJA2O43164 708 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 CSDE1O75534 798 aaKnown RBP10.44□□□□□ -0.74
CMC1-209ENST00000477739 SLITRK3O94933 977 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 KITP10721 976 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 CA4P22748 312 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 Q4G0T1 1027 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 CEP55Q53EZ4 464 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 TATDN1Q6P1N9 297 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 TMEM270Q6UE05 265 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 ZNF662Q6ZS27 426 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 FUKQ8N0W3 1084 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 GMCL1P1Q8NEA9 526 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 CEP170P1Q96L14 293 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 NACC1Q96RE7 527 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 ZNF341Q9BYN7 854 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 VCPKMTQ9H867 229 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 SLCO1B3Q9NPD5 702 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 RNF19AQ9NV58 838 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 PCSK1NQ9UHG2 260 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 AGTPBP1Q9UPW5 1226 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 MYH1P12882 1939 aa10.44□□□□□ -0.74
CMC1-209ENST00000477739 PASKQ96RG2 1323 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 CYP3A7-CYP3A51PA0A087WV96 503 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 CCDC195A0A1B0GUA6 201 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 DENND3A2RUS2 1198 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 CCDC188H7C350 402 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 TRAPPC3O43617 180 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 SHOX2O60902 331 aaPredicted RBP10.43□□□□□ -0.74
CMC1-209ENST00000477739 RARAP10276 462 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 GAP43P17677 238 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 CYP3A7P24462 503 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 PRELPP51888 382 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 GPC5P78333 572 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 NEDD9Q14511 834 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 KCNT1Q5JUK3 1230 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 HYIQ5T013 277 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 MOXD1Q6UVY6 613 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 HAUS6Q7Z4H7 955 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 IL31RAQ8NI17 732 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 NAP1L3Q99457 506 aaPredicted RBP10.43□□□□□ -0.74
CMC1-209ENST00000477739 CDC42EP4Q9H3Q1 356 aaKnown RBP10.43□□□□□ -0.74
CMC1-209ENST00000477739 NOD2Q9HC29 1040 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 NXF1Q9UBU9 619 aaKnown RBP10.43□□□□□ -0.74
CMC1-209ENST00000477739 SEPT9Q9UHD8 586 aaPredicted RBP10.43□□□□□ -0.74
CMC1-209ENST00000477739 SUFUQ9UMX1 484 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 SGK1O00141 431 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 RPS6KA5O75582 802 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 CYP3A4P08684 503 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 PRLRP16471 622 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 ITGA8P53708 1063 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 MXRA7P84157 204 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 MAPK7Q13164 816 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 RCN2Q14257 317 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 RRP1BQ14684 758 aaKnown RBP10.43□□□□□ -0.74
CMC1-209ENST00000477739 EML3Q32P44 896 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 RPAINQ86UA6 219 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 LDHDQ86WU2 507 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 ATP8B4Q8TF62 1192 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 JDP2Q8WYK2 163 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 RSRC1Q96IZ7 334 aaKnown RBP10.43□□□□□ -0.74
CMC1-209ENST00000477739 MARCOQ9UEW3 520 aaPredicted RBP10.43□□□□□ -0.74
CMC1-209ENST00000477739 HERC5Q9UII4 1024 aaKnown RBP10.43□□□□□ -0.74
CMC1-209ENST00000477739 MRPL42Q9Y6G3 142 aaKnown RBP10.43□□□□□ -0.74
CMC1-209ENST00000477739 EXOC1LA0A1B0GW35 172 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 LRRD1A4D1F6 860 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 CHRM1P11229 460 aaPredicted RBP10.43□□□□□ -0.74
CMC1-209ENST00000477739 RRM1P23921 792 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 NUMBP49757 651 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 NRLP54845 237 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 SGSM1Q2NKQ1 1148 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 PPP1R21Q6ZMI0 780 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 NOP9Q86U38 636 aaKnown RBP10.43□□□□□ -0.74
CMC1-209ENST00000477739 PRELID2Q8N945 189 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 STK32BQ9NY57 414 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 HSPBP1Q9NZL4 362 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 PCDHB4Q9Y5E5 795 aa10.43□□□□□ -0.74
CMC1-209ENST00000477739 RALAP11233 206 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 GCLCP48506 637 aaPredicted RBP10.42□□□□□ -0.74
CMC1-209ENST00000477739 CDO1Q16878 200 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms