RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ARID2Q68CP9 1835 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 ZNF236Q9UL36 1845 aa8.58□□□□□ -1.04
VMA21-203ENST00000477649 MACROD2A1Z1Q3 448 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 LRRIQ3A6PVS8 624 aaPredicted RBP8.57□□□□□ -1.04
VMA21-203ENST00000477649 ACKR2O00590 384 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 FANCGO15287 622 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 OGTO15294 1046 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 ATP8B1O43520 1251 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 RRP9O43818 475 aaKnown RBP8.57□□□□□ -1.04
VMA21-203ENST00000477649 ITGBL1O95965 494 aaPredicted RBP8.57□□□□□ -1.04
VMA21-203ENST00000477649 LGALS2P05162 132 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 ADRB2P07550 413 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 TMEM253P0C7T8 217 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 TNFAIP3P21580 790 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 TBXAS1P24557 533 aaPredicted RBP8.57□□□□□ -1.04
VMA21-203ENST00000477649 PHKA2P46019 1235 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 HADHBP55084 474 aaKnown RBP8.57□□□□□ -1.04
VMA21-203ENST00000477649 PTENP60484 403 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 TNFAIP2Q03169 654 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 ARID5AQ03989 594 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 MCL1Q07820 350 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 LAMTOR4Q0VGL1 99 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 SREBF2Q12772 1141 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 MAP2K5Q13163 448 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 ACVR2BQ13705 512 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 DGKDQ16760 1214 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 ZACNQ401N2 412 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 OLFML2BQ68BL8 750 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 PHLDB3Q6NSJ2 640 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 TSHZ1Q6ZSZ6 1077 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 SV2AQ7L0J3 742 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 ZNF572Q7Z3I7 529 aaPredicted RBP8.57□□□□□ -1.04
VMA21-203ENST00000477649 WDR49Q8IV35 697 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 RHOT2Q8IXI1 618 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 SLC30A5Q8TAD4 765 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 SHC3Q92529 594 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 TAF4BQ92750 862 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 CCDC127Q96BQ5 260 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 HHIPL1Q96JK4 782 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 CGRRF1Q99675 332 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 FAM213AQ9BRX8 229 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 SYT11Q9BT88 431 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 MSTO1Q9BUK6 570 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 KATNBL1Q9H079 304 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 CCDC113Q9H0I3 377 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 PDCL3Q9H2J4 239 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 FZD8Q9H461 694 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 FAM124BQ9H5Z6 455 aaPredicted RBP8.57□□□□□ -1.04
VMA21-203ENST00000477649 UBE2TQ9NPD8 197 aaPredicted RBP8.57□□□□□ -1.04
VMA21-203ENST00000477649 C1orf112Q9NSG2 853 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 RBAKQ9NYW8 714 aaPredicted RBP8.57□□□□□ -1.04
VMA21-203ENST00000477649 SNX12Q9UMY4 172 aa8.57□□□□□ -1.04
VMA21-203ENST00000477649 ADGRA2Q96PE1 1338 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 MYH9P35579 1960 aaKnown RBP8.56□□□□□ -1.04
VMA21-203ENST00000477649 GRID2IPA4D2P6 1211 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 ANKRD62A6NC57 917 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 GOLGA8IPA6NC78 632 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 RCCD1A6NED2 376 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 GOLGA8JA6NMD2 632 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 ZBTB42B2RXF5 422 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 ZEB2O60315 1214 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 MSCO60682 206 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 PEX10O60683 326 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 KPNA6O60684 536 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 IL18RAPO95256 599 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 C22orf31O95567 290 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 SNAI1O95863 264 aaPredicted RBP8.56□□□□□ -1.04
VMA21-203ENST00000477649 RPLP2P05387 115 aaKnown RBP8.56□□□□□ -1.04
VMA21-203ENST00000477649 PRKCBP05771 671 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 RGS2P41220 211 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 PAFAH1B1P43034 410 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 MATR3P43243 847 aaKnown RBP eCLIP8.56□□□□□ -1.04
VMA21-203ENST00000477649 ZNF157P51786 506 aaPredicted RBP8.56□□□□□ -1.04
VMA21-203ENST00000477649 NAP1L1P55209 391 aaKnown RBP8.56□□□□□ -1.04
VMA21-203ENST00000477649 DLG4P78352 724 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 BRD3Q15059 726 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 MORN1Q5T089 497 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 CST9Q5W186 159 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 RGMBQ6NW40 437 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 EFCAB12Q6NXP0 572 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 TRIM72Q6ZMU5 477 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 ZNF410Q86VK4 478 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 NT5DC4Q86YG4 428 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 RASAL3Q86YV0 1011 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 BRSK2Q8IWQ3 736 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 RNF149Q8NC42 400 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 CTNNBL1Q8WYA6 563 aaPredicted RBP8.56□□□□□ -1.04
VMA21-203ENST00000477649 SAAL1Q96ER3 474 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 ACO2Q99798 780 aaKnown RBP8.56□□□□□ -1.04
VMA21-203ENST00000477649 AGPAT1Q99943 283 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 PTPN18Q99952 460 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 TARS2Q9BW92 718 aaKnown RBP8.56□□□□□ -1.04
VMA21-203ENST00000477649 IMPG2Q9BZV3 1241 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 GPR88Q9GZN0 384 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 IKZF4Q9H2S9 585 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 SUGCTQ9HAC7 445 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 ZFYVE28Q9HCC9 887 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 TRIM10Q9UDY6 481 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 TNFSF13BQ9Y275 285 aa8.56□□□□□ -1.04
VMA21-203ENST00000477649 NCANO14594 1321 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms