RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 RPAINQ86UA6 219 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 OR5B17Q8NGF7 314 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 CXCL16Q9H2A7 254 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 NLRC4Q9NPP4 1024 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 DNAJC12Q9UKB3 198 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 ABT1Q9ULW3 272 aaKnown RBP13.15□□□□□ -0.3
PRPF39-203ENST00000477626 A0A1B0GUA9 196 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 GPR25O00155 361 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 B4GALT4O60513 344 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 RGS2P41220 211 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 MGAT3Q09327 533 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 DRAP1Q14919 205 aaPredicted RBP13.15□□□□□ -0.3
PRPF39-203ENST00000477626 DGKDQ16760 1214 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 EEF1DP3Q658K8 133 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 KRT39Q6A163 491 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 ISCUQ9H1K1 167 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 ZFYVE28Q9HCC9 887 aa13.15□□□□□ -0.3
PRPF39-203ENST00000477626 AGO2Q9UKV8 859 aaKnown RBP13.15□□□□□ -0.3
PRPF39-203ENST00000477626 MAGEB2O15479 319 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 SMIM10L2AP0DMW4 78 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 SMIM10L2BP0DMW5 78 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 CYP2C19P33261 490 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 SLFN12LQ6IEE8 588 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 CYP4F22Q6NT55 531 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 TLK2Q86UE8 772 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 JAKMIP2Q96AA8 810 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 PCDHB18PQ96TA0 734 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 C2orf40Q9H1Z8 148 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 CDT1Q9H211 546 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 CDHR5Q9HBB8 845 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 INTUQ9ULD6 942 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 BZW2Q9Y6E2 419 aaKnown RBP13.14□□□□□ -0.31
PRPF39-203ENST00000477626 A0A0A6YYK5 440 aaPredicted RBP13.14□□□□□ -0.31
PRPF39-203ENST00000477626 SMIM35A0A1B0GVV1 85 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 ZBTB6Q15916 424 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 SYCP3Q8IZU3 236 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 ZNF397Q8NF99 534 aaPredicted RBP13.14□□□□□ -0.31
PRPF39-203ENST00000477626 EPS8L1Q8TE68 723 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 FAM213AQ9BRX8 229 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 VRTNQ9H8Y1 702 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 CREBZFQ9NS37 354 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 SIX4Q9UIU6 781 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 R3HCC1Q9Y3T6 440 aaKnown RBP13.14□□□□□ -0.31
PRPF39-203ENST00000477626 HNRNPDLO14979 420 aaKnown RBP13.14□□□□□ -0.31
PRPF39-203ENST00000477626 NCBP1Q09161 790 aaKnown RBP13.14□□□□□ -0.31
PRPF39-203ENST00000477626 MPZL3Q6UWV2 235 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 DPP9Q86TI2 863 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 OR6J1Q8NGC5 347 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 TMEM40Q8WWA1 233 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 NRCAMQ92823 1304 aa13.14□□□□□ -0.31
PRPF39-203ENST00000477626 K7ERI5 159 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 NOP56O00567 594 aaKnown RBP13.13□□□□□ -0.31
PRPF39-203ENST00000477626 TRIM32Q13049 653 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 ZNF410Q86VK4 478 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 SLC35F6Q8N357 371 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 RNF149Q8NC42 400 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 MRPL4Q9BYD3 311 aaKnown RBP13.13□□□□□ -0.31
PRPF39-203ENST00000477626 RAB20Q9NX57 234 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 SLC5A4Q9NY91 659 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 TDRD15B5MCY1 1934 aaKnown RBP13.13□□□□□ -0.31
PRPF39-203ENST00000477626 TADA3O75528 432 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 MTA2O94776 668 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 TFRCP02786 760 aaKnown RBP13.13□□□□□ -0.31
PRPF39-203ENST00000477626 PRKCBP05771 671 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 WDR49Q8IV35 697 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 TMEM130Q8N3G9 435 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 POMGNT1Q8WZA1 660 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 TATDN2Q93075 761 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 WNT8BQ93098 351 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 JPH2Q9BR39 696 aaPredicted RBP13.13□□□□□ -0.31
PRPF39-203ENST00000477626 DNAI1Q9UI46 699 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 TCRBV5S1A1TA0A578 114 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 AOC2O75106 756 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 DUSP11O75319 330 aaKnown RBP13.13□□□□□ -0.31
PRPF39-203ENST00000477626 PRLRP16471 622 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 BMS1Q14692 1282 aaKnown RBP13.13□□□□□ -0.31
PRPF39-203ENST00000477626 TRAF7Q6Q0C0 670 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 NOP9Q86U38 636 aaKnown RBP13.13□□□□□ -0.31
PRPF39-203ENST00000477626 GLG1Q92896 1179 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 ZSWIM1Q9BR11 485 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 LZTFL1Q9NQ48 299 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 TAS2R14Q9NYV8 317 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 IVNS1ABPQ9Y6Y0 642 aa13.13□□□□□ -0.31
PRPF39-203ENST00000477626 TPM1P09493 284 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 KRT83P78385 493 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 FMO1Q01740 532 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 UBXN11Q5T124 520 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
PRPF39-203ENST00000477626 RDH13Q8NBN7 331 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 FBXL13Q8NEE6 735 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 FAXDC2Q96IV6 333 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 PDE11AQ9HCR9 933 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 UMODL1Q5DID0 1318 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 PTPRSQ13332 1948 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 ZNF233A6NK53 670 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 OGTO15294 1046 aa13.12□□□□□ -0.31
PRPF39-203ENST00000477626 STAU1O95793 577 aaKnown RBP13.12□□□□□ -0.31
PRPF39-203ENST00000477626 ASS1P00966 412 aaKnown RBP13.12□□□□□ -0.31
PRPF39-203ENST00000477626 UNGP13051 313 aaPredicted RBP13.12□□□□□ -0.31
PRPF39-203ENST00000477626 ARF4P18085 180 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms