RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 IRF2BP1Q8IU81 584 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 ACTRT1Q8TDG2 376 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 TTC25Q96NG3 672 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 MEIS2O14770 477 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 SLC8A1P32418 973 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 MDH1P40925 334 aaKnown RBP15.59■□□□□ 0.09
HDAC6-220ENST00000477528 BYSLQ13895 437 aaKnown RBP15.59■□□□□ 0.09
HDAC6-220ENST00000477528 SNCBQ16143 134 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 BBS9Q3SYG4 887 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 SLC35C1Q96A29 364 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 SPC25Q9HBM1 224 aa15.59■□□□□ 0.09
HDAC6-220ENST00000477528 A0A1B0GUA9 196 aa15.58■□□□□ 0.09
HDAC6-220ENST00000477528 EXTL3O43909 919 aa15.58■□□□□ 0.09
HDAC6-220ENST00000477528 SNHG28P0DPA3 235 aa15.58■□□□□ 0.09
HDAC6-220ENST00000477528 RFC5P40937 340 aa15.58■□□□□ 0.09
HDAC6-220ENST00000477528 GABPAQ06546 454 aa15.58■□□□□ 0.09
HDAC6-220ENST00000477528 C7orf31Q8N865 590 aa15.58■□□□□ 0.09
HDAC6-220ENST00000477528 GLIS3Q8NEA6 775 aa15.58■□□□□ 0.09
HDAC6-220ENST00000477528 ATL2Q8NHH9 583 aa15.58■□□□□ 0.09
HDAC6-220ENST00000477528 ERP44Q9BS26 406 aa15.58■□□□□ 0.09
HDAC6-220ENST00000477528 DDX56Q9NY93 547 aaKnown RBP15.58■□□□□ 0.09
HDAC6-220ENST00000477528 DBR1Q9UK59 544 aaKnown RBP15.58■□□□□ 0.09
HDAC6-220ENST00000477528 KRT7P08729 469 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 NR1H3Q13133 447 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 ANGEL2Q5VTE6 544 aaKnown RBP15.58■□□□□ 0.08
HDAC6-220ENST00000477528 PCGF5Q86SE9 256 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 SCYL3Q8IZE3 742 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 CASKIN2Q8WXE0 1202 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 CDKL2Q92772 493 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 FAM149B1Q96BN6 582 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 SPATA33Q96N06 139 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 CBWD1Q9BRT8 395 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 ZNF446Q9NWS9 450 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 GTF3C4Q9UKN8 822 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 NFIBO00712 420 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 MAPTP10636 758 aaKnown RBP15.58■□□□□ 0.08
HDAC6-220ENST00000477528 DDX42Q86XP3 938 aaKnown RBP eCLIP15.58■□□□□ 0.08
HDAC6-220ENST00000477528 ZNF677Q86XU0 584 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 NME8Q8N427 588 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 PROCA1Q8NCQ7 364 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-220ENST00000477528 GDAP1Q8TB36 358 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 SLC10A4Q96EP9 437 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 AGO4Q9HCK5 861 aaKnown RBP15.58■□□□□ 0.08
HDAC6-220ENST00000477528 PPP1R9AQ9ULJ8 1098 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 FRMPD4Q14CM0 1322 aa15.58■□□□□ 0.08
HDAC6-220ENST00000477528 H3BQF6 201 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 EML1O00423 815 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 HLA-DRAP01903 254 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 MMP14P50281 582 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 TFDP2Q14188 446 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 NUGGCQ68CJ6 796 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 C4orf19Q8IY42 314 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 RNF149Q8NC42 400 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 CPA5Q8WXQ8 436 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 SEPT1Q8WYJ6 367 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 OTUD5Q96G74 571 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 ASNSD1Q9NWL6 643 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 PRKCBP05771 671 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 ARL4CP56559 192 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 EZH2Q15910 746 aaKnown RBP15.57■□□□□ 0.08
HDAC6-220ENST00000477528 HSPH1Q92598 858 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 RILPQ96NA2 401 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 TLR10Q9BXR5 811 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 GPRC5CQ9NQ84 441 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 MT-ND3P03897 115 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 CA4P22748 312 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 PPP2R5DQ14738 602 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 SYTL5Q8TDW5 730 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-220ENST00000477528 NCAPGQ9BPX3 1015 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 ELAC2Q9BQ52 826 aaKnown RBP15.57■□□□□ 0.08
HDAC6-220ENST00000477528 CELF4Q9BZC1 486 aaKnown RBP15.57■□□□□ 0.08
HDAC6-220ENST00000477528 HACL1Q9UJ83 578 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 PLSCR1O15162 318 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 NPM3O75607 178 aaKnown RBP15.57■□□□□ 0.08
HDAC6-220ENST00000477528 SASH3O75995 380 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 TFRCP02786 760 aaKnown RBP15.57■□□□□ 0.08
HDAC6-220ENST00000477528 PSMC1P62191 440 aaKnown RBP15.57■□□□□ 0.08
HDAC6-220ENST00000477528 NCOA4Q13772 614 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 AGBL2Q5U5Z8 902 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 SAMD7Q7Z3H4 446 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 CHST13Q8NET6 341 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 MMP19Q99542 508 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 KIFC3Q9BVG8 833 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 EPN3Q9H201 632 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 SEPT10Q9P0V9 454 aa15.57■□□□□ 0.08
HDAC6-220ENST00000477528 CPP00450 1065 aa15.56■□□□□ 0.08
HDAC6-220ENST00000477528 ARL4AP40617 200 aa15.56■□□□□ 0.08
HDAC6-220ENST00000477528 MXD4Q14582 209 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-220ENST00000477528 CBWD2Q8IUF1 395 aa15.56■□□□□ 0.08
HDAC6-220ENST00000477528 RBBP8NLQ8NC74 664 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-220ENST00000477528 HNRNPH3P31942 346 aaKnown RBP15.56■□□□□ 0.08
HDAC6-220ENST00000477528 IRAK1P51617 712 aa15.56■□□□□ 0.08
HDAC6-220ENST00000477528 NIPA1Q7RTP0 329 aa15.56■□□□□ 0.08
HDAC6-220ENST00000477528 PIK3CDO00329 1044 aa15.56■□□□□ 0.08
HDAC6-220ENST00000477528 NAA25Q14CX7 972 aa15.56■□□□□ 0.08
HDAC6-220ENST00000477528 FAM47CQ5HY64 1035 aa15.56■□□□□ 0.08
HDAC6-220ENST00000477528 FKBP1CQ5VVH2 108 aa15.56■□□□□ 0.08
HDAC6-220ENST00000477528 IZUMO3Q5VZ72 239 aa15.56■□□□□ 0.08
HDAC6-220ENST00000477528 TTC39CQ8N584 583 aa15.56■□□□□ 0.08
HDAC6-220ENST00000477528 NGRNQ9NPE2 291 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms