RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 SLFN14P0C7P3 912 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 KCNE1P15382 129 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 DNAJB1P25685 340 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 MRPS5P82675 430 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 TUSC3Q13454 348 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 DHX8Q14562 1220 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 POSTNQ15063 836 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 TMEM184AQ6ZMB5 413 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 ZNF280BQ86YH2 543 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 EFHBQ8N7U6 833 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 TCHPQ9BT92 498 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 COLEC11Q9BWP8 271 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 TRIM9Q9C026 710 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 PARP2Q9UGN5 583 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 EXOC7Q9UPT5 735 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 HPSEQ9Y251 543 aa13.53□□□□□ -0.24
CLCNKA-205ENST00000477360 A0A0B4J269 797 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 PVALEFA0A1B0GWK0 134 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 TMEM189-UBE2V1I3L0A0 370 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 RBAK-RBAKDNI3L0D1 243 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 NRP1O14786 923 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 KIAA0391O15091 583 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 POLR2DO15514 142 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 DDHD2O94830 711 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 POMCP01189 267 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 ADRB2P07550 413 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 CLTAP09496 248 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 CTSAP10619 480 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 LIG1P18858 919 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 PAX3P23760 479 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 AKAP5P24588 427 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 SLC11A1P49279 550 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 LIG4P49917 911 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 SCNN1GP51170 649 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 AFF1P51825 1210 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 SNRPFP62306 86 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 SMC1AQ14683 1233 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 TCEAL5Q5H9L2 206 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 CDR2LQ86X02 465 aaPredicted RBP13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 CD302Q8IX05 232 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 RNF168Q8IYW5 571 aaPredicted RBP13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 PDILTQ8N807 584 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 MRPL43Q8N983 215 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 CCDC34Q96HJ3 373 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 ZFP42Q96MM3 310 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 ACAP3Q96P50 834 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 TMEM206Q9H813 350 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 UBE2ZQ9H832 354 aaPredicted RBP13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 SNTG2Q9NY99 539 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 CNTN3Q9P232 1028 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 HCSTQ9UBK5 93 aa13.52□□□□□ -0.25
CLCNKA-205ENST00000477360 KIAA1671Q9BY89 1806 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 PTGESO14684 152 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 OGTO15294 1046 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 SRGAP2BP0DMP2 458 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 ERVFC1P60507 584 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 CACNB1Q02641 598 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 HYAL1Q12794 435 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 ELAVL2Q12926 359 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 HSP90AA2PQ14568 343 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 NAB2Q15742 525 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 CCDC85BQ15834 202 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 LEXMQ3ZCV2 418 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 HERC4Q5GLZ8 1057 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 DYMQ7RTS9 669 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 SFR1Q86XK3 245 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 CEP57L1Q8IYX8 460 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 MICALL1Q8N3F8 863 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 DHX58Q96C10 678 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 BICD1Q96G01 975 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 DDX27Q96GQ7 796 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 ASB2Q96Q27 587 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 PPP1R10Q96QC0 940 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 TCF25Q9BQ70 676 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 PANK2Q9BZ23 570 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 ZHX3Q9H4I2 956 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 MRPL44Q9H9J2 332 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 PANK4Q9NVE7 773 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 MIOSQ9NXC5 875 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 DNAJB4Q9UDY4 337 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 FAM50BQ9Y247 325 aa13.51□□□□□ -0.25
CLCNKA-205ENST00000477360 UBE4BO95155 1302 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 EIF3DO15371 548 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 SOD2P04179 222 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 CYP3A5P20815 502 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 RPL9P32969 192 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 CREMQ03060 361 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 ADAM15Q13444 863 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 KCNC3Q14003 757 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 SKIV2LQ15477 1246 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 DUSP6Q16828 381 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 FOXD4L6Q3SYB3 417 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 LONRF3Q496Y0 759 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 TJAP1Q5JTD0 557 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 L1TD1Q5T7N2 865 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 FOXD4L3Q6VB84 417 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 UNC13DQ70J99 1090 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 TMC7Q7Z402 723 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 PPFIBP1Q86W92 1011 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 TMEM87AQ8NBN3 555 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms