RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 TRIM49P0CI25 452 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 TRIM49CP0CI26 452 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 MCF2P10911 925 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 ATF7P17544 494 aaPredicted RBP10.12□□□□□ -0.79
PGK1-204ENST00000477335 AXLP30530 894 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 MCCD1P59942 119 aaPredicted RBP10.12□□□□□ -0.79
PGK1-204ENST00000477335 OSTNP61366 133 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 FANCCQ00597 558 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 CYP24A1Q07973 514 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 PAK2Q13177 524 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 ENOX2Q16206 610 aaKnown RBP10.12□□□□□ -0.79
PGK1-204ENST00000477335 SLFN12LQ6IEE8 588 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 NOTUMQ6P988 496 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 TRIM59Q8IWR1 403 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 FAM186BQ8IYM0 893 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 THNSL1Q8IYQ7 743 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 GPD1LQ8N335 351 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 CCDC155Q8N6L0 562 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 MFSD14AQ96MC6 490 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 NXF3Q9H4D5 531 aaKnown RBP10.12□□□□□ -0.79
PGK1-204ENST00000477335 PRDM5Q9NQX1 630 aaPredicted RBP10.12□□□□□ -0.79
PGK1-204ENST00000477335 RNF19AQ9NV58 838 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 CPSF3Q9UKF6 684 aaKnown RBP10.12□□□□□ -0.79
PGK1-204ENST00000477335 SQORQ9Y6N5 450 aa10.12□□□□□ -0.79
PGK1-204ENST00000477335 CCDC85CA6NKD9 419 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 LRRIQ3A6PVS8 624 aaPredicted RBP10.11□□□□□ -0.79
PGK1-204ENST00000477335 GPR182O15218 404 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 TEX33O43247 280 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 STAG3L1P0CL83 205 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 CXCL8P10145 99 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 RPL13P26373 211 aaKnown RBP10.11□□□□□ -0.79
PGK1-204ENST00000477335 PSMC2P35998 433 aaKnown RBP10.11□□□□□ -0.79
PGK1-204ENST00000477335 GRM5P41594 1212 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 MATR3P43243 847 aaKnown RBP eCLIP10.11□□□□□ -0.79
PGK1-204ENST00000477335 COPB1P53618 953 aaKnown RBP10.11□□□□□ -0.79
PGK1-204ENST00000477335 PPP3CAQ08209 521 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 PCBP1Q15365 356 aaKnown RBP eCLIP10.11□□□□□ -0.79
PGK1-204ENST00000477335 SNRNP35Q16560 246 aaKnown RBP10.11□□□□□ -0.79
PGK1-204ENST00000477335 TMEM132AQ24JP5 1023 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 UVSSAQ2YD98 709 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 PLEKHG4Q58EX7 1191 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 SLC27A1Q6PCB7 646 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 SARM1Q6SZW1 724 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 FRMD5Q7Z6J6 570 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 BRSK2Q8IWQ3 736 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 C7orf61Q8IZ16 206 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 DBF4BQ8NFT6 615 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 TET1Q8NFU7 2136 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 SLC35C1Q96A29 364 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 POP1Q99575 1024 aaKnown RBP10.11□□□□□ -0.79
PGK1-204ENST00000477335 TCHPQ9BT92 498 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 MKNK1Q9BUB5 465 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 IFIH1Q9BYX4 1025 aaKnown RBP10.11□□□□□ -0.79
PGK1-204ENST00000477335 SNTG2Q9NY99 539 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 IFNKQ9P0W0 207 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 IPPQ9Y573 584 aa10.11□□□□□ -0.79
PGK1-204ENST00000477335 A0A1B0GTH6 734 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 LRRC10BA6NIK2 292 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 STK25O00506 426 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 MAPK13O15264 365 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 TIMP1P01033 207 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 EPB41P11171 864 aaKnown RBP10.1□□□□□ -0.79
PGK1-204ENST00000477335 CSF2RAP15509 400 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 EEF1GP26641 437 aaKnown RBP10.1□□□□□ -0.79
PGK1-204ENST00000477335 SPAG1Q07617 926 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 BFSP1Q12934 665 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 PSMD6Q15008 389 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 SLC10A6Q3KNW5 377 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 DCAF4L1Q3SXM0 396 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 CCDC40Q4G0X9 1142 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 LMBRD2Q68DH5 695 aaPredicted RBP10.1□□□□□ -0.79
PGK1-204ENST00000477335 DEFB128Q7Z7B8 93 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 CREBRFQ8IUR6 639 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 EFCAB13Q8IY85 973 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 USP38Q8NB14 1042 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 PARD3BQ8TEW8 1205 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 ZNF516Q92618 1163 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 LPPQ93052 612 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 CCDC51Q96ER9 411 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 ADAM2Q99965 735 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 TUBGCP2Q9BSJ2 902 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 VPS16Q9H269 839 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 PDE11AQ9HCR9 933 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 CHST12Q9NRB3 414 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 RBAKQ9NYW8 714 aaPredicted RBP10.1□□□□□ -0.79
PGK1-204ENST00000477335 ARMCX3Q9UH62 379 aaPredicted RBP10.1□□□□□ -0.79
PGK1-204ENST00000477335 FRMD4BQ9Y2L6 1034 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 PCDHB2Q9Y5E7 798 aa10.1□□□□□ -0.79
PGK1-204ENST00000477335 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.09□□□□□ -0.79
PGK1-204ENST00000477335 TTC26A0AVF1 554 aa10.09□□□□□ -0.79
PGK1-204ENST00000477335 ZNF233A6NK53 670 aa10.09□□□□□ -0.79
PGK1-204ENST00000477335 LGALS16A8MUM7 142 aa10.09□□□□□ -0.79
PGK1-204ENST00000477335 LACTBL1A8MY62 500 aa10.09□□□□□ -0.79
PGK1-204ENST00000477335 C9IYK1 514 aa10.09□□□□□ -0.79
PGK1-204ENST00000477335 KIAA0391O15091 583 aaKnown RBP10.09□□□□□ -0.79
PGK1-204ENST00000477335 LRRN2O75325 713 aa10.09□□□□□ -0.79
PGK1-204ENST00000477335 RECQL4O94761 1208 aa10.09□□□□□ -0.79
PGK1-204ENST00000477335 FGFR1OPO95684 399 aaKnown RBP10.09□□□□□ -0.79
PGK1-204ENST00000477335 GNA14O95837 355 aa10.09□□□□□ -0.79
PGK1-204ENST00000477335 CLTAP09496 248 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms