RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 LRRC43Q8N309 656 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 C12orf76Q8N812 135 aaPredicted RBP12.76□□□□□ -0.37
LSM2-212ENST00000477182 CNNM3Q8NE01 707 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 LARP4BQ92615 738 aaKnown RBP12.76□□□□□ -0.37
LSM2-212ENST00000477182 STAMQ92783 540 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 FAM167AQ96KS9 214 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 CCDC43Q96MW1 224 aaKnown RBP12.76□□□□□ -0.37
LSM2-212ENST00000477182 SH2D3AQ9BRG2 576 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 BHMT2Q9H2M3 363 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 CUEDC2Q9H467 287 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 TBC1D17Q9HA65 648 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 NRBP2Q9NSY0 501 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 ANKEF1Q9NU02 776 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 SIT1Q9Y3P8 196 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 FAM208BQ5VWN6 2430 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 SMIM35A0A1B0GVV1 85 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 KRBA1A5PL33 1030 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 ARHGEF35A5YM69 484 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 GPR182O15218 404 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 TRAK2O60296 914 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 MGEA5O60502 916 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 CXCL14O95715 111 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 CFHP08603 1231 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 FGFR1P11362 822 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 XRCC6P12956 609 aaKnown RBP eCLIP12.75□□□□□ -0.37
LSM2-212ENST00000477182 AFMP43652 599 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 SLC12A3P55017 1021 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 FAM189BP81408 668 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 ZNF528Q3MIS6 628 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 MTERF2Q49AM1 385 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 XKR9Q5GH70 373 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 SV2BQ7L1I2 683 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 OTUD6AQ7L8S5 288 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 ABI1Q8IZP0 508 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 KCTD17Q8N5Z5 321 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 BBXQ8WY36 941 aaPredicted RBP12.75□□□□□ -0.37
LSM2-212ENST00000477182 PAGE5Q96GU1 130 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 CEP170P1Q96L14 293 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 TIGD1Q96MW7 591 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 SFXN1Q9H9B4 322 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 MAGEF1Q9HAY2 307 aa12.75□□□□□ -0.37
LSM2-212ENST00000477182 CACNA1IQ9P0X4 2223 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 DCDC2BA2VCK2 349 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 HBP1O60381 514 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 DCNP07585 359 aaKnown RBP12.74□□□□□ -0.37
LSM2-212ENST00000477182 RARRES1P49788 294 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 CAMK4Q16566 473 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 KLHL40Q2TBA0 621 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 SKOR2Q2VWA4 1001 aaPredicted RBP12.74□□□□□ -0.37
LSM2-212ENST00000477182 TMC5Q6UXY8 1006 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 GPR149Q86SP6 731 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 PPFIBP1Q86W92 1011 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 GPBP1Q86WP2 473 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 SYT2Q8N9I0 419 aaPredicted RBP12.74□□□□□ -0.37
LSM2-212ENST00000477182 TRAPPC12Q8WVT3 735 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 NXPE3Q969Y0 559 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 MTRQ99707 1265 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 RUSC1Q9BVN2 902 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 NIFKQ9BYG3 293 aaKnown RBP12.74□□□□□ -0.37
LSM2-212ENST00000477182 NUP62CLQ9H1M0 184 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 TNMDQ9H2S6 317 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 CLSTN2Q9H4D0 955 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 KBTBD4Q9NVX7 518 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 DLGAP2Q9P1A6 1054 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 IRAK3Q9Y616 596 aa12.74□□□□□ -0.37
LSM2-212ENST00000477182 GPR179Q6PRD1 2367 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.73□□□□□ -0.37
LSM2-212ENST00000477182 CARNS1A5YM72 827 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 MYMKA6NI61 221 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 SPDYE4A6NLX3 237 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 NARSO43776 548 aaKnown RBP12.73□□□□□ -0.37
LSM2-212ENST00000477182 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
LSM2-212ENST00000477182 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 SRFP11831 508 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 CYP11B2P19099 503 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 CASP1P29466 404 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 DMWDQ09019 674 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 PNOCQ13519 176 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 ACAP1Q15027 740 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 TARBP2Q15633 366 aaKnown RBP12.73□□□□□ -0.37
LSM2-212ENST00000477182 KANK3Q6NY19 840 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 CAVIN1Q6NZI2 390 aaKnown RBP12.73□□□□□ -0.37
LSM2-212ENST00000477182 PADI6Q6TGC4 694 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 LRRC55Q6ZSA7 311 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 SLC39A11Q8N1S5 342 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 ZBTB10Q96DT7 871 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 CASD1Q96PB1 797 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 BLZF1Q9H2G9 400 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
LSM2-212ENST00000477182 TMEM63CQ9P1W3 806 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 CA14Q9ULX7 337 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 ST3GAL5Q9UNP4 418 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 GINS2Q9Y248 185 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 NOC2LQ9Y3T9 749 aaKnown RBP12.73□□□□□ -0.37
LSM2-212ENST00000477182 PCDHGA2Q9Y5H1 932 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 PKD1L2Q7Z442 2459 aa12.73□□□□□ -0.37
LSM2-212ENST00000477182 COL1A2P08123 1366 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 NPHP3-ACAD11A0A0J9YXS1 232 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 ZBTB42B2RXF5 422 aa12.72□□□□□ -0.37
LSM2-212ENST00000477182 EPCAMP16422 314 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms