RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 COLEC11Q9BWP8 271 aa14.72□□□□□ -0.05
ACTN4-205ENST00000477174 CDT1Q9H211 546 aa14.72□□□□□ -0.05
ACTN4-205ENST00000477174 ENTPD7Q9NQZ7 604 aa14.72□□□□□ -0.05
ACTN4-205ENST00000477174 TOPORSQ9NS56 1045 aaPredicted RBP14.72□□□□□ -0.05
ACTN4-205ENST00000477174 KBTBD4Q9NVX7 518 aa14.72□□□□□ -0.05
ACTN4-205ENST00000477174 FAM13BQ9NYF5 915 aa14.72□□□□□ -0.05
ACTN4-205ENST00000477174 GDAQ9Y2T3 454 aa14.72□□□□□ -0.05
ACTN4-205ENST00000477174 NLRC5Q86WI3 1866 aa14.72□□□□□ -0.05
ACTN4-205ENST00000477174 SPTBN5Q9NRC6 3674 aaKnown RBP14.71□□□□□ -0.05
ACTN4-205ENST00000477174 K7ENM7 598 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 PIGRP01833 764 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 KCNA5P22460 613 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 OR1G1P47890 313 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 NRIP1P48552 1158 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 YARSP54577 528 aaKnown RBP14.71□□□□□ -0.05
ACTN4-205ENST00000477174 NUCB2P80303 420 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 MCL1Q07820 350 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 TUSC3Q13454 348 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 SMC1AQ14683 1233 aaKnown RBP14.71□□□□□ -0.05
ACTN4-205ENST00000477174 KYAT1Q16773 422 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 LEXMQ3ZCV2 418 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 RESP18Q5W5W9 173 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 ALKAL1Q6UXT8 129 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 ZBTB33Q86T24 672 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 SPATA32Q96LK8 384 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 ACAP3Q96P50 834 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 SCAND2PQ9GZW5 306 aaPredicted RBP14.71□□□□□ -0.05
ACTN4-205ENST00000477174 TNMDQ9H2S6 317 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 IGFLR1Q9H665 355 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 CLDND1Q9NY35 253 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 IRAK3Q9Y616 596 aa14.71□□□□□ -0.05
ACTN4-205ENST00000477174 BRWD1Q9NSI6 2320 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 PTGESO14684 152 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 CSPG5O95196 566 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 CXCL14O95715 111 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 CTSAP10619 480 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 BMP1P13497 986 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 CMA1P23946 247 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 NMT1P30419 496 aaKnown RBP14.7□□□□□ -0.06
ACTN4-205ENST00000477174 DUSP6Q16828 381 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 PUS10Q3MIT2 529 aaKnown RBP14.7□□□□□ -0.06
ACTN4-205ENST00000477174 XKR4Q5GH76 650 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 HERC4Q5GLZ8 1057 aaPredicted RBP14.7□□□□□ -0.06
ACTN4-205ENST00000477174 ADALQ6DHV7 355 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 ADGRD2Q7Z7M1 963 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 RBM23Q86U06 439 aaKnown RBP14.7□□□□□ -0.06
ACTN4-205ENST00000477174 BCL7CQ8WUZ0 217 aaPredicted RBP14.7□□□□□ -0.06
ACTN4-205ENST00000477174 LEO1Q8WVC0 666 aaPredicted RBP14.7□□□□□ -0.06
ACTN4-205ENST00000477174 DHX58Q96C10 678 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 BICD1Q96G01 975 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 ZBTB45Q96K62 511 aaPredicted RBP14.7□□□□□ -0.06
ACTN4-205ENST00000477174 MRPL44Q9H9J2 332 aaKnown RBP14.7□□□□□ -0.06
ACTN4-205ENST00000477174 MAGEF1Q9HAY2 307 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 OLFML3Q9NRN5 406 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 KCNH3Q9ULD8 1083 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 PCDHGC5Q9Y5F6 944 aa14.7□□□□□ -0.06
ACTN4-205ENST00000477174 COL4A4P53420 1690 aaPredicted RBP14.7□□□□□ -0.06
ACTN4-205ENST00000477174 FRMD3A2A2Y4 597 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 C2orf71A6NGG8 1288 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 HIDE1A8MVS5 230 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 HNRNPDLO14979 420 aaKnown RBP14.69□□□□□ -0.06
ACTN4-205ENST00000477174 PER2O15055 1255 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 POLR2DO15514 142 aaKnown RBP14.69□□□□□ -0.06
ACTN4-205ENST00000477174 EFEMP2O95967 443 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 CLTAP09496 248 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 IDEP14735 1019 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 GTF2F1P35269 517 aaKnown RBP eCLIP14.69□□□□□ -0.06
ACTN4-205ENST00000477174 LTBRP36941 435 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 LIG4P49917 911 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 NOLC1Q14978 699 aaKnown RBP eCLIP14.69□□□□□ -0.06
ACTN4-205ENST00000477174 PLPP4Q5VZY2 271 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 CNNM4Q6P4Q7 775 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 TMEM184AQ6ZMB5 413 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 EP400NLQ6ZTU2 488 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 SFR1Q86XK3 245 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 MAP4K3Q8IVH8 894 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 CCDC65Q8IXS2 484 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 HVCN1Q96D96 273 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 STRA6Q9BX79 667 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 ZBP1Q9H171 429 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 PANK4Q9NVE7 773 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 ANKFY1Q9P2R3 1169 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 PRG3Q9Y2Y8 225 aaPredicted RBP14.69□□□□□ -0.06
ACTN4-205ENST00000477174 PCDHB13Q9Y5F0 798 aa14.69□□□□□ -0.06
ACTN4-205ENST00000477174 VCANP13611 3396 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 A0A0B4J269 797 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 SMIM28A0A1B0GU29 152 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 SOD2P04179 222 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 KCNE1P15382 129 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 MATR3P43243 847 aaKnown RBP eCLIP14.68□□□□□ -0.06
ACTN4-205ENST00000477174 OSTNP61366 133 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 ALCAMQ13740 583 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 NAB2Q15742 525 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 ZC2HC1CQ53FD0 456 aaPredicted RBP14.68□□□□□ -0.06
ACTN4-205ENST00000477174 SLFN12LQ6IEE8 588 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 CEP120Q8N960 986 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 TMEM87AQ8NBN3 555 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 PPP1R10Q96QC0 940 aaKnown RBP14.68□□□□□ -0.06
ACTN4-205ENST00000477174 C7orf25Q9BPX7 421 aa14.68□□□□□ -0.06
ACTN4-205ENST00000477174 VN1R3Q9BXE9 311 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms