RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ZSWIM6Q9HCJ5 1215 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 POLD4Q9HCU8 107 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 FBXW11Q9UKB1 542 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 POLIQ9UNA4 740 aa13.31□□□□□ -0.28
HDAC6-219ENST00000476625 RIF1Q5UIP0 2472 aaKnown RBP13.31□□□□□ -0.28
HDAC6-219ENST00000476625 ZNF292O60281 2723 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 GVINP1Q7Z2Y8 2422 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 CARNS1A5YM72 827 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 USO1O60763 962 aaKnown RBP13.3□□□□□ -0.28
HDAC6-219ENST00000476625 KRT37O76014 449 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 PAPLNO95428 1278 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 C8AP07357 584 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 ARL2P36404 184 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 HSP90AA2PQ14568 343 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-219ENST00000476625 RSPO4Q2I0M5 234 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-219ENST00000476625 USP41Q3LFD5 358 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 FAM171A1Q5VUB5 890 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 RSPO2Q6UXX9 243 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-219ENST00000476625 CENPQQ7L2Z9 268 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-219ENST00000476625 CNNM3Q8NE01 707 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 LNX1Q8TBB1 728 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-219ENST00000476625 BSNDQ8WZ55 320 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 FGF13Q92913 245 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 FAM20AQ96MK3 541 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 EIF2AK1Q9BQI3 630 aaKnown RBP13.3□□□□□ -0.28
HDAC6-219ENST00000476625 UBN1Q9NPG3 1134 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 SLC2A4RGQ9NR83 387 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 SPATA6Q9NWH7 488 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-219ENST00000476625 ZDHHC7Q9NXF8 308 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 SNTG2Q9NY99 539 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 SSX2IPQ9Y2D8 614 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 GIT1Q9Y2X7 761 aa13.3□□□□□ -0.28
HDAC6-219ENST00000476625 PDCD11Q14690 1871 aaKnown RBP13.29□□□□□ -0.28
HDAC6-219ENST00000476625 I3L4J1 428 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 ASAP2O43150 1006 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 MARCH6O60337 910 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 TADA2AO75478 443 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 CTDNEP1O95476 244 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 LIG1P18858 919 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 STARD6P59095 220 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 GRIK3Q13003 919 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 UBXN2BQ14CS0 331 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 PSMD5Q16401 504 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 PPP4R3AQ6IN85 833 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 IFNLR1Q8IU57 520 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-219ENST00000476625 TMEM130Q8N3G9 435 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 SLC7A14Q8TBB6 771 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 RHOBTB2Q9BYZ6 727 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 PLEKHA4Q9H4M7 779 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 ZSWIM4Q9H7M6 989 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 FNIP2Q9P278 1114 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 CDH7Q9ULB5 785 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 FRYLO94915 3013 aa13.29□□□□□ -0.28
HDAC6-219ENST00000476625 LRRIQ4A6NIV6 560 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 SHISA7A6NL88 538 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 PSMA5P28066 241 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 AXLP30530 894 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 RARRES1P49788 294 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 CSTF1Q05048 431 aaKnown RBP13.28□□□□□ -0.28
HDAC6-219ENST00000476625 NAB2Q15742 525 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 MLF2Q15773 248 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-219ENST00000476625 SLC5A9Q2M3M2 681 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 GLRA4Q5JXX5 417 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 PPM1LQ5SGD2 360 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 EEF1DP3Q658K8 133 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 SLC27A1Q6PCB7 646 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 CYP26C1Q6V0L0 522 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 OTUD6AQ7L8S5 288 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 NOSTRINQ8IVI9 506 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 HDAC7Q8WUI4 952 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 RUBCNQ92622 972 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 TNFRSF25Q93038 417 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 ZNF274Q96GC6 653 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-219ENST00000476625 CNTNAP3BQ96NU0 1288 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 CNTNAP3Q9BZ76 1288 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 PDZD7Q9H5P4 517 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 GOLGA2P5Q9HBQ8 144 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.28□□□□□ -0.28
HDAC6-219ENST00000476625 DNMT3BQ9UBC3 853 aaKnown RBP13.28□□□□□ -0.28
HDAC6-219ENST00000476625 STK39Q9UEW8 545 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 CYP46A1Q9Y6A2 500 aa13.28□□□□□ -0.28
HDAC6-219ENST00000476625 A0A1B0GUA9 196 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 KANSL1LA0AUZ9 987 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 FAM170BA6NMN3 283 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 DKC1O60832 514 aaKnown RBP eCLIP13.27□□□□□ -0.29
HDAC6-219ENST00000476625 RECQL4O94761 1208 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 LARGE1O95461 756 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 TARSP26639 723 aaKnown RBP13.27□□□□□ -0.29
HDAC6-219ENST00000476625 TFDP1Q14186 410 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 MXD4Q14582 209 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-219ENST00000476625 SLC44A4Q53GD3 710 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 CD300LGQ6UXG3 332 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 NPAS3Q8IXF0 933 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 NXPE3Q969Y0 559 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 CCDC51Q96ER9 411 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 MCRS1Q96EZ8 462 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 HSD17B14Q9BPX1 270 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 TTPALQ9BTX7 342 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 KIFC3Q9BVG8 833 aa13.27□□□□□ -0.29
HDAC6-219ENST00000476625 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms