RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PNMA5Q96PV4 448 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 PAAF1Q9BRP4 392 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 NTPCRQ9BSD7 190 aaKnown RBP11.89□□□□□ -0.51
SEC13-214ENST00000476597 CXCL16Q9H2A7 254 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 TMEM134Q9H6X4 195 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 C17orf75Q9HAS0 396 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 PTPRHQ9HD43 1115 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 ADAM28Q9UKQ2 775 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 TNFSF13BQ9Y275 285 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 NR2E1Q9Y466 385 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 RBM19Q9Y4C8 960 aaKnown RBP11.89□□□□□ -0.51
SEC13-214ENST00000476597 MUC6Q6W4X9 2439 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 VWA3AA6NCI4 1184 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 CCDC169A6NNP5 214 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 SFI1A8K8P3 1242 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 C2CD4DB7Z1M9 353 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 TADA2AO75478 443 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 RECQL4O94761 1208 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 GUCY2CP25092 1073 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 CUL4AQ13619 759 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 HSP90AA2PQ14568 343 aaPredicted RBP11.88□□□□□ -0.51
SEC13-214ENST00000476597 TAS1R3Q7RTX0 852 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 SYT2Q8N9I0 419 aaPredicted RBP11.88□□□□□ -0.51
SEC13-214ENST00000476597 CMASQ8NFW8 434 aaPredicted RBP11.88□□□□□ -0.51
SEC13-214ENST00000476597 FEZF2Q8TBJ5 459 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 RABGGTAQ92696 567 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 DRC1Q96MC2 740 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 MFSD14AQ96MC6 490 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 ACO2Q99798 780 aaKnown RBP11.88□□□□□ -0.51
SEC13-214ENST00000476597 TIPINQ9BVW5 301 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 NT5C3AQ9H0P0 336 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 SFXN1Q9H9B4 322 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 FNIP2Q9P278 1114 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 ARHGAP28Q9P2N2 729 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 KCNG1Q9UIX4 513 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 USTQ9Y2C2 406 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 GDAQ9Y2T3 454 aa11.88□□□□□ -0.51
SEC13-214ENST00000476597 WDFY4Q6ZS81 3184 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 TMEM221A6NGB7 291 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 CASTOR2A6NHX0 329 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 M0R296 226 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 ADH1AP07327 375 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 SP100P23497 879 aaPredicted RBP11.87□□□□□ -0.51
SEC13-214ENST00000476597 PLA2G5P39877 138 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 SLC12A3P55017 1021 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 SIGLEC14Q08ET2 396 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 ZRSR1Q15695 479 aaKnown RBP11.87□□□□□ -0.51
SEC13-214ENST00000476597 PTPN21Q16825 1174 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 TMEM119Q4V9L6 283 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 LILRA6Q6PI73 481 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 C15orf39Q6ZRI6 1047 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 ZDHHC14Q8IZN3 488 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 HDAC7Q8WUI4 952 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 SPIRE2Q8WWL2 714 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 FAM122AQ96E09 287 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 B3GALT6Q96L58 329 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 AK8Q96MA6 479 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 PLIN2Q99541 437 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 RHOBTB2Q9BYZ6 727 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 KMT5AQ9NQR1 393 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.87□□□□□ -0.51
SEC13-214ENST00000476597 CACNG4Q9UBN1 327 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 DPP7Q9UHL4 492 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 ARID2Q68CP9 1835 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 PIEZO1Q92508 2521 aa11.87□□□□□ -0.51
SEC13-214ENST00000476597 PHLPP2Q6ZVD8 1323 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 SLC26A4O43511 780 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 TGM5O43548 720 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 PAPLNO95428 1278 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 GLUD1P00367 558 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 PLA2G4BP0C869 781 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 PLS3P13797 630 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 DMP1Q13316 513 aaPredicted RBP11.86□□□□□ -0.51
SEC13-214ENST00000476597 XKR4Q5GH76 650 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 RTP2Q5QGT7 225 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 DCLRE1AQ6PJP8 1040 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 ALKAL1Q6UXT8 129 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 CYP26C1Q6V0L0 522 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 BRAPQ7Z569 592 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 APBB1IPQ7Z5R6 666 aaPredicted RBP11.86□□□□□ -0.51
SEC13-214ENST00000476597 PALB2Q86YC2 1186 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 RIN2Q8WYP3 895 aaPredicted RBP11.86□□□□□ -0.51
SEC13-214ENST00000476597 PBXIP1Q96AQ6 731 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 ASIC4Q96FT7 647 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 PPP1R10Q96QC0 940 aaKnown RBP11.86□□□□□ -0.51
SEC13-214ENST00000476597 TARS2Q9BW92 718 aaKnown RBP11.86□□□□□ -0.51
SEC13-214ENST00000476597 MRPL4Q9BYD3 311 aaKnown RBP11.86□□□□□ -0.51
SEC13-214ENST00000476597 CDT1Q9H211 546 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 PLEKHA4Q9H4M7 779 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 MAN1C1Q9NR34 630 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 KCND2Q9NZV8 630 aa11.86□□□□□ -0.51
SEC13-214ENST00000476597 SF3B1O75533 1304 aaKnown RBP eCLIP11.86□□□□□ -0.514e-7■■■■■ 40.1
SEC13-214ENST00000476597 TECTAO75443 2155 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 SMIM28A0A1B0GU29 152 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 CCDC195A0A1B0GUA6 201 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 SPDYE4A6NLX3 237 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 ABLIM1O14639 778 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 SLC16A4O15374 487 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms