RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 LIN9Q5TKA1 542 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 C4orf19Q8IY42 314 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 BLIDQ8IZY5 108 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 CLDN23Q96B33 292 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 KXD1Q9BQD3 176 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 TRIM6Q9C030 488 aaPredicted RBP18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 SLKQ9H2G2 1235 aaPredicted RBP18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 KCNMB3Q9NPA1 279 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 MIA3Q5JRA6 1907 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 DOCK6Q96HP0 2047 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 SF3B1O75533 1304 aaKnown RBP eCLIP18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 MYH15Q9Y2K3 1946 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 ZBTB39O15060 712 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 CCL16O15467 120 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 ARF4P18085 180 aaPredicted RBP18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 TARSP26639 723 aaKnown RBP18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 CCT2P78371 535 aaKnown RBP18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 MBTD1Q05BQ5 628 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 NPY5RQ15761 445 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 INF2Q27J81 1249 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 TSSK4Q6SA08 328 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 IFNLR1Q8IU57 520 aaPredicted RBP18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 HACE1Q8IYU2 909 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 FBXL16Q8N461 479 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 PIK3R5Q8WYR1 880 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 KCNB2Q92953 911 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 FAM20AQ96MK3 541 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 JAKMIP1Q96N16 626 aaKnown RBP18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 MTRQ99707 1265 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 PAAF1Q9BRP4 392 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 LXNQ9BS40 222 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 RTKNQ9BST9 563 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 TTPALQ9BTX7 342 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 PHF20Q9BVI0 1012 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 AGXT2Q9BYV1 514 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 XPNPEP1Q9NQW7 623 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 RGL1Q9NZL6 768 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 KLK14Q9P0G3 267 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 USP18Q9UMW8 372 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 POLIQ9UNA4 740 aa18.3■□□□□ 0.52
APOBEC3F-203ENST00000476513 PATJQ8NI35 1801 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 TBC1D4O60343 1298 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 XYLBO75191 536 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 PDIA3P30101 505 aaKnown RBP18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 HOXA9P31269 272 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 HSP90AA2PQ14568 343 aaPredicted RBP18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 MXD4Q14582 209 aaPredicted RBP18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 XKR9Q5GH70 373 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 BMP2KLQ5H9B9 411 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 BLOC1S2Q6QNY1 142 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 TPRG1Q6ZUI0 275 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 OTUD6AQ7L8S5 288 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 CEP57Q86XR8 500 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 DAGLBQ8NCG7 672 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 LNX1Q8TBB1 728 aaPredicted RBP18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 HASPINQ8TF76 798 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 NELL2Q99435 816 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 PARD6AQ9NPB6 346 aa18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 PRMT8Q9NR22 394 aaPredicted RBP18.29■□□□□ 0.52
APOBEC3F-203ENST00000476513 ADAM12O43184 909 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 B4GALT5O43286 388 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 NPTXRO95502 500 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 RPS9P46781 194 aaKnown RBP18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 POU5F1BQ06416 359 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 FZD5Q13467 585 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 TFDP1Q14186 410 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 EPHA7Q15375 998 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 PSMD5Q16401 504 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 FAM171A1Q5VUB5 890 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 CDR2LQ86X02 465 aaPredicted RBP18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 NPAS3Q8IXF0 933 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 TRIM22Q8IYM9 498 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 ASAP3Q8TDY4 903 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 DYDC2Q96IM9 177 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 YTHDC1Q96MU7 727 aaKnown RBP18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 HCFC1R1Q9NWW0 138 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 PARP2Q9UGN5 583 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 ZMYM2Q9UBW7 1377 aa18.28■□□□□ 0.52
APOBEC3F-203ENST00000476513 NCAM2O15394 837 aa18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 POU2F2P09086 479 aa18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 RPS6KB1P23443 525 aa18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 SSRP1Q08945 709 aaKnown RBP18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 CAPSQ13938 189 aa18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 CTTNQ14247 550 aaKnown RBP18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 SLC27A1Q6PCB7 646 aa18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 SLC7A14Q8TBB6 771 aa18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 ING5Q8WYH8 240 aa18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 HAS1Q92839 578 aa18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 DNMT3BQ9UBC3 853 aaKnown RBP18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 GMEB2Q9UKD1 530 aa18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 KCNH3Q9ULD8 1083 aa18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 SNX14Q9Y5W7 946 aa18.27■□□□□ 0.52
APOBEC3F-203ENST00000476513 TDRD15B5MCY1 1934 aaKnown RBP18.27■□□□□ 0.51
APOBEC3F-203ENST00000476513 MAP1BP46821 2468 aaKnown RBP18.27■□□□□ 0.51
APOBEC3F-203ENST00000476513 CASTOR2A6NHX0 329 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 SHISA7A6NL88 538 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 KIF4AO95239 1232 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 ADRB1P08588 477 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 EVCP57679 992 aa18.26■□□□□ 0.51
APOBEC3F-203ENST00000476513 CYP4A11Q02928 519 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms