RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 IRF5Q13568 498 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 MFN1Q8IWA4 741 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 GALNT15Q8N3T1 639 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 DDX50Q9BQ39 737 aaKnown RBP8.99□□□□□ -0.97
VAPB-205ENST00000476395 GORASP1Q9BQQ3 440 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 THAP2Q9H0W7 228 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 BHMT2Q9H2M3 363 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 METTL5Q9NRN9 209 aaKnown RBP8.99□□□□□ -0.97
VAPB-205ENST00000476395 INTUQ9ULD6 942 aa8.99□□□□□ -0.97
VAPB-205ENST00000476395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 IPO5O00410 1097 aaKnown RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 ENTPD5O75356 428 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 SERPINB2P05120 415 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 GSTA1P08263 222 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 ALAS1P13196 640 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 CNGA1P29973 690 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 MCCD1P59942 119 aaPredicted RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 CYP4A11Q02928 519 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 SLC29A2Q14542 456 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 GALNTL6Q49A17 601 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 ANKRD42Q8N9B4 389 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 KRT35Q92764 455 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 CD101Q93033 1021 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 PPP1R12CQ9BZL4 782 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 USP40Q9NVE5 1235 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 ZNF232Q9UNY5 417 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 BCS1LQ9Y276 419 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 CFAP73A6NFT4 308 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 TISP43B9A030 160 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 TBX3O15119 743 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 MMP13P45452 471 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 PEX5P50542 639 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 BNIP1Q12981 228 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 LLGL1Q15334 1064 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 DCAF17Q5H9S7 520 aaPredicted RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 OTOP1Q7RTM1 612 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 CCHCR1Q8TD31 782 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 PIGOQ8TEQ8 1089 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 SLC20A1Q8WUM9 679 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 EIF2AK1Q9BQI3 630 aaKnown RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 SEMA4AQ9H3S1 761 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 ARHGEF3Q9NR81 526 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 WDR35Q9P2L0 1181 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 CTNNAL1Q9UBT7 734 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 LRRD1A4D1F6 860 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 RIMBP2O15034 1052 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 KIAA0391O15091 583 aaKnown RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 ASAP2O43150 1006 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 PSMD10O75832 226 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 CYP3A4P08684 503 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 XRCC5P13010 732 aaKnown RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 ETS2P15036 469 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 GNAZP19086 355 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 LMNB1P20700 586 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 RXRBP28702 533 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 HOXA13P31271 388 aaPredicted RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 SOX5P35711 763 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 MAGEA10P43363 369 aaPredicted RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 CD151P48509 253 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 PLTPP55058 493 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 CTTNQ14247 550 aaKnown RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 ITIH4Q14624 930 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 PDCD2Q16342 344 aaPredicted RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 CGB2Q6NT52 195 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 MTHFD1LQ6UB35 978 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 ARMC9Q7Z3E5 817 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 ARHGAP22Q7Z5H3 698 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 SYCP3Q8IZU3 236 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 OGFOD1Q8N543 542 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 P3H4Q92791 437 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 RBM41Q96IZ5 413 aaKnown RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 POLR3CQ9BUI4 534 aaPredicted RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 SLITRK6Q9H5Y7 841 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 ETNK1Q9HBU6 452 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 SNX24Q9Y343 169 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 ASB3Q9Y575 518 aa8.98□□□□□ -0.97
VAPB-205ENST00000476395 BZW2Q9Y6E2 419 aaKnown RBP8.98□□□□□ -0.97
VAPB-205ENST00000476395 hCG_2014768A0A024R1R8 64 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 PEX11AO75192 247 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 FGGP02679 453 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 TARSP26639 723 aaKnown RBP8.97□□□□□ -0.97
VAPB-205ENST00000476395 GCLCP48506 637 aaPredicted RBP8.97□□□□□ -0.97
VAPB-205ENST00000476395 FMO5P49326 533 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 ZNF211Q13398 564 aaPredicted RBP8.97□□□□□ -0.97
VAPB-205ENST00000476395 HHATQ5VTY9 493 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 VTI1AQ96AJ9 217 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 TRIM4Q9C037 500 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 BBOX1O75936 387 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 EYA4O95677 639 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 TMEM253P0C7T8 217 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 TRIM49P0CI25 452 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 TRIM49CP0CI26 452 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 CHRNB2P17787 502 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 ANXA13P27216 316 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 AP3B2Q13367 1082 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 PRPF4BQ13523 1007 aaKnown RBP8.97□□□□□ -0.97
VAPB-205ENST00000476395 KIF22Q14807 665 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 TCEAL1Q15170 157 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 SLC27A3Q5K4L6 730 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 ASRGL1Q7L266 308 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms