RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ANAPC5Q9UJX4 755 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SIPA1L3O60292 1781 aaPredicted RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 BAZ2AQ9UIF9 1905 aaKnown RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 GPR75-ASB3A0A0A6YYF3 556 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SEMA3EO15041 775 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 TRPA1O75762 1119 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 ECEL1O95672 775 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 TUBBP07437 444 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 VIL1P09327 827 aaKnown RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 WEE2P0C1S8 567 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 CCDC172P0C7W6 258 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 ETS1P14921 441 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 CNGA1P29973 690 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SHMT1P34896 483 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SMTNP53814 917 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 NRLP54845 237 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 KRT17Q04695 432 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 TMEM62Q0P6H9 643 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 TRPC3Q13507 836 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 VGLL4Q14135 290 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SETDB1Q15047 1291 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 NT5DC1Q5TFE4 455 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SWSAP1Q6NVH7 229 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 RNF207Q6ZRF8 634 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 NLRX1Q86UT6 975 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 ZBED8Q8IZ13 594 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 VPS52Q8N1B4 723 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 CCDC89Q8N998 374 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 ZNF507Q8TCN5 953 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 HAS1Q92839 578 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 RSRC1Q96IZ7 334 aaKnown RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 TEKT3Q9BXF9 490 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 NSRP1Q9H0G5 558 aaKnown RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SMYD3Q9H7B4 428 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 KIF9Q9HAQ2 790 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SLC40A1Q9NP59 571 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 RIC8AQ9NPQ8 531 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 KMT5AQ9NQR1 393 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 CPA4Q9UI42 421 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 IGSF9BQ9UPX0 1349 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 KDM3AQ9Y4C1 1321 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 RFX7Q2KHR2 1363 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SCN9AQ15858 1988 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 KLRG2A4D1S0 409 aaPredicted RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 CFAP69A5D8W1 941 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 NFIBO00712 420 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SLC4A1P02730 911 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 KRT1P04264 644 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 TARSP26639 723 aaKnown RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 POLGP54098 1239 aaPredicted RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 LACTBP83111 547 aaPredicted RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 TUBB2AQ13885 445 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 PTGISQ16647 500 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 TREML2Q5T2D2 321 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 PAPD7Q5XG87 772 aaKnown RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 UBR3Q6ZT12 1888 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 LRRC43Q8N309 656 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SLC5A5Q92911 643 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 MYCBPQ99417 103 aaPredicted RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 C7orf25Q9BPX7 421 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 LZTS2Q9BRK4 669 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 TUBB2BQ9BVA1 445 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 CYP4F11Q9HBI6 524 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 C1orf112Q9NSG2 853 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 KLHL14Q9P2G3 628 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SLC4A7Q9Y6M7 1214 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 WDR19Q8NEZ3 1342 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 RASSF10A6NK89 507 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 DDX3XO00571 662 aaKnown RBP eCLIP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 KCNB1Q14721 858 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 AMHR2Q16671 573 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 NCAPG2Q86XI2 1143 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 JAMLQ86YT9 394 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 ARHGEF19Q8IW93 802 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 PALM2Q8IXS6 379 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SYCE1Q8N0S2 351 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 TMEM130Q8N3G9 435 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 RBM46Q8TBY0 533 aaKnown RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 SPOCK2Q92563 424 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 CDCA5Q96FF9 252 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 CEP41Q9BYV8 373 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 TRIM6Q9C030 488 aaPredicted RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 ZCWPW1Q9H0M4 648 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 TSR3Q9UJK0 312 aaKnown RBP5.33□□□□□ -1.56
CCDC39-204ENST00000476379 PNMA3Q9UL41 463 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 PRR12Q9ULL5 1215 aa5.33□□□□□ -1.56
CCDC39-204ENST00000476379 MYH6P13533 1939 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 TMEM120BA0PK00 339 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ANO9A1A5B4 782 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 C2orf71A6NGG8 1288 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 GLTPD2A6NH11 291 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 GAS8O95995 478 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 GH1P01241 217 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 PLS3P13797 630 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 PBX1P40424 430 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 FMO5P49326 533 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 POLE2P56282 527 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 BFSP1Q12934 665 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 GPS1Q13098 491 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms