RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 MFSD1Q9H3U5 465 aa14.52□□□□□ -0.09
MRPL55-228ENST00000476267 KRBA1A5PL33 1030 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 PRR23AA6NEV1 266 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 KIF4AO95239 1232 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 MYBP10242 640 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 RPL17P18621 184 aaKnown RBP14.51□□□□□ -0.09
MRPL55-228ENST00000476267 RPA1P27694 616 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 MCM7P33993 719 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 NEK4P51957 841 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 TUSC3Q13454 348 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 ELMSAN1Q6PJG2 1045 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 PRSS55Q6UWB4 352 aaPredicted RBP14.51□□□□□ -0.09
MRPL55-228ENST00000476267 MAEAQ7L5Y9 396 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 PALB2Q86YC2 1186 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 CCDC105Q8IYK2 499 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 RIN2Q8WYP3 895 aaPredicted RBP14.51□□□□□ -0.09
MRPL55-228ENST00000476267 STAMQ92783 540 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 CCDC43Q96MW1 224 aaKnown RBP14.51□□□□□ -0.09
MRPL55-228ENST00000476267 PRKD2Q9BZL6 878 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 WNT16Q9UBV4 365 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 PARP2Q9UGN5 583 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 FBXW11Q9UKB1 542 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 DCHS1Q96JQ0 3298 aa14.51□□□□□ -0.09
MRPL55-228ENST00000476267 SF3B1O75533 1304 aaKnown RBP eCLIP14.5□□□□□ -0.09
MRPL55-228ENST00000476267 ANHXE9PGG2 379 aa14.5□□□□□ -0.09
MRPL55-228ENST00000476267 ZMYND10O75800 440 aa14.5□□□□□ -0.09
MRPL55-228ENST00000476267 ATP2B1P20020 1258 aa14.5□□□□□ -0.09
MRPL55-228ENST00000476267 GBP2P32456 591 aaPredicted RBP14.5□□□□□ -0.09
MRPL55-228ENST00000476267 CREMQ03060 361 aa14.5□□□□□ -0.09
MRPL55-228ENST00000476267 ORC2Q13416 577 aaPredicted RBP14.5□□□□□ -0.09
MRPL55-228ENST00000476267 SIX5Q8N196 739 aa14.5□□□□□ -0.09
MRPL55-228ENST00000476267 SLC44A3Q8N4M1 653 aa14.5□□□□□ -0.09
MRPL55-228ENST00000476267 FLCNQ8NFG4 579 aa14.5□□□□□ -0.09
MRPL55-228ENST00000476267 LNX1Q8TBB1 728 aaPredicted RBP14.5□□□□□ -0.09
MRPL55-228ENST00000476267 PIK3R5Q8WYR1 880 aa14.5□□□□□ -0.09
MRPL55-228ENST00000476267 NXPE3Q969Y0 559 aa14.5□□□□□ -0.09
MRPL55-228ENST00000476267 NACC1Q96RE7 527 aa14.5□□□□□ -0.09
MRPL55-228ENST00000476267 CLSTN3Q9BQT9 956 aa14.5□□□□□ -0.09
MRPL55-228ENST00000476267 C2orf40Q9H1Z8 148 aa14.5□□□□□ -0.09
MRPL55-228ENST00000476267 SNTG2Q9NY99 539 aa14.5□□□□□ -0.09
MRPL55-228ENST00000476267 CASTOR2A6NHX0 329 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 ACKR2O00590 384 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 N4BP3O15049 544 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 RECQL4O94761 1208 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 SEC24BO95487 1268 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 SRFP11831 508 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 LAMP2P13473 410 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 CYP11B2P19099 503 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 MUTP22033 750 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 NAMPTP43490 491 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 GUCY1B3Q02153 619 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 HTR4Q13639 388 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 TRIM29Q14134 588 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 ECM1Q16610 540 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 EEF1DP3Q658K8 133 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 PADI6Q6TGC4 694 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 GLYCTKQ8IVS8 523 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 ZBTB8OSQ8IWT0 167 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 C4orf32Q8N8J7 132 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 HASPINQ8TF76 798 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 RTP3Q9BQQ7 232 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 USP20Q9Y2K6 914 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 COL4A3Q01955 1670 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 MYH15Q9Y2K3 1946 aa14.49□□□□□ -0.09
MRPL55-228ENST00000476267 ADAM12O43184 909 aa14.48□□□□□ -0.09
MRPL55-228ENST00000476267 TADA2AO75478 443 aa14.48□□□□□ -0.09
MRPL55-228ENST00000476267 PRKCBP05771 671 aa14.48□□□□□ -0.09
MRPL55-228ENST00000476267 CFHP08603 1231 aa14.48□□□□□ -0.09
MRPL55-228ENST00000476267 OR52Z1P0C646 297 aa14.48□□□□□ -0.09
MRPL55-228ENST00000476267 IGFBP6P24592 240 aaPredicted RBP14.48□□□□□ -0.09
MRPL55-228ENST00000476267 PRPF4BQ13523 1007 aaKnown RBP14.48□□□□□ -0.09
MRPL55-228ENST00000476267 MAPK6Q16659 721 aa14.48□□□□□ -0.09
MRPL55-228ENST00000476267 CD300LGQ6UXG3 332 aa14.48□□□□□ -0.09
MRPL55-228ENST00000476267 FRMD5Q7Z6J6 570 aa14.48□□□□□ -0.09
MRPL55-228ENST00000476267 DTWD2Q8NBA8 298 aa14.48□□□□□ -0.09
MRPL55-228ENST00000476267 TTPALQ9BTX7 342 aa14.48□□□□□ -0.09
MRPL55-228ENST00000476267 FOXP1Q9H334 677 aaPredicted RBP14.48□□□□□ -0.09
MRPL55-228ENST00000476267 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.48□□□□□ -0.09
MRPL55-228ENST00000476267 FBXL21Q9UKT6 434 aa14.48□□□□□ -0.09
MRPL55-228ENST00000476267 NOTCH4Q99466 2003 aa14.48□□□□□ -0.09
MRPL55-228ENST00000476267 CACNA1HO95180 2353 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 TMEM189-UBE2V1I3L0A0 370 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 THP07101 528 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 POU2F2P09086 479 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 HOXA9P31269 272 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.09
MRPL55-228ENST00000476267 ANGPT1Q15389 498 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 PSMD5Q16401 504 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 NT5DC1Q5TFE4 455 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 FAM171A1Q5VUB5 890 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 GET4Q7L5D6 327 aaPredicted RBP14.47□□□□□ -0.09
MRPL55-228ENST00000476267 NOSTRINQ8IVI9 506 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 FBXO18Q8NFZ0 1043 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 PPP1R10Q96QC0 940 aaKnown RBP14.47□□□□□ -0.09
MRPL55-228ENST00000476267 LLPHQ9BRT6 129 aaKnown RBP14.47□□□□□ -0.09
MRPL55-228ENST00000476267 KIFC3Q9BVG8 833 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 SLC2A4RGQ9NR83 387 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 DLGAP2Q9P1A6 1054 aa14.47□□□□□ -0.09
MRPL55-228ENST00000476267 HNRNPA1P09651 372 aaKnown RBP eCLIP14.46□□□□□ -0.09
MRPL55-228ENST00000476267 FGFR3P22607 806 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms