RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 PCOLCEQ15113 449 aa6.6□□□□□ -1.35
SSR3-206ENST00000476217 RNF219Q5W0B1 726 aaPredicted RBP6.6□□□□□ -1.35
SSR3-206ENST00000476217 DYDC2Q96IM9 177 aa6.6□□□□□ -1.35
SSR3-206ENST00000476217 SAMD11Q96NU1 681 aa6.6□□□□□ -1.35
SSR3-206ENST00000476217 MYL10Q9BUA6 226 aa6.6□□□□□ -1.35
SSR3-206ENST00000476217 BDH2Q9BUT1 245 aa6.6□□□□□ -1.35
SSR3-206ENST00000476217 OSBPL6Q9BZF3 934 aa6.6□□□□□ -1.35
SSR3-206ENST00000476217 POFUT1Q9H488 388 aa6.6□□□□□ -1.35
SSR3-206ENST00000476217 PRDM11Q9NQV5 511 aa6.6□□□□□ -1.35
SSR3-206ENST00000476217 NR2E1Q9Y466 385 aa6.6□□□□□ -1.35
SSR3-206ENST00000476217 NUMBLQ9Y6R0 609 aa6.6□□□□□ -1.35
SSR3-206ENST00000476217 CAMTA1Q9Y6Y1 1673 aa6.6□□□□□ -1.35
SSR3-206ENST00000476217 COL18A1P39060 1754 aa6.59□□□□□ -1.35
SSR3-206ENST00000476217 NEMP1O14524 444 aa6.59□□□□□ -1.35
SSR3-206ENST00000476217 OPHN1O60890 802 aa6.59□□□□□ -1.35
SSR3-206ENST00000476217 XPAP23025 273 aaPredicted RBP6.59□□□□□ -1.35
SSR3-206ENST00000476217 TMPOP42166 694 aaKnown RBP6.59□□□□□ -1.35
SSR3-206ENST00000476217 FILIP1Q7Z7B0 1213 aa6.59□□□□□ -1.35
SSR3-206ENST00000476217 CIR1Q86X95 450 aaPredicted RBP6.59□□□□□ -1.35
SSR3-206ENST00000476217 BCL6BQ8N143 479 aaPredicted RBP6.59□□□□□ -1.35
SSR3-206ENST00000476217 CDYL2Q8N8U2 506 aa6.59□□□□□ -1.35
SSR3-206ENST00000476217 SLC7A6OSQ96CW6 309 aaPredicted RBP6.59□□□□□ -1.35
SSR3-206ENST00000476217 WDR92Q96MX6 357 aa6.59□□□□□ -1.35
SSR3-206ENST00000476217 ACAP3Q96P50 834 aa6.59□□□□□ -1.35
SSR3-206ENST00000476217 LMF1Q96S06 567 aa6.59□□□□□ -1.35
SSR3-206ENST00000476217 RBM15Q96T37 977 aaKnown RBP eCLIP6.59□□□□□ -1.35
SSR3-206ENST00000476217 MTG2Q9H4K7 406 aa6.59□□□□□ -1.35
SSR3-206ENST00000476217 PUF60Q9UHX1 559 aaKnown RBP6.59□□□□□ -1.35
SSR3-206ENST00000476217 LMO7Q8WWI1 1683 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 KDRP35968 1356 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 MYPNQ86TC9 1320 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 ZNF521Q96K83 1311 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 KDM1AO60341 852 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 FSBPO95073 299 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 EYA4O95677 639 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 RIPK4P57078 832 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 LMOD3Q0VAK6 560 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 LARP4Q71RC2 724 aaKnown RBP eCLIP6.58□□□□□ -1.363e-7■□□□□ 8.4
SSR3-206ENST00000476217 SPATS2Q86XZ4 545 aaKnown RBP6.58□□□□□ -1.36
SSR3-206ENST00000476217 UBR7Q8N806 425 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 NEIL1Q96FI4 390 aaPredicted RBP6.58□□□□□ -1.36
SSR3-206ENST00000476217 ZNF496Q96IT1 587 aaPredicted RBP6.58□□□□□ -1.36
SSR3-206ENST00000476217 PAWRQ96IZ0 340 aaKnown RBP6.58□□□□□ -1.36
SSR3-206ENST00000476217 PHACTR3Q96KR7 559 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 NOL10Q9BSC4 688 aaKnown RBP6.58□□□□□ -1.36
SSR3-206ENST00000476217 NELFAQ9H3P2 528 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 PPP4R1LQ9P1A2 415 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 FAM184BQ9ULE4 1060 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.58□□□□□ -1.36
SSR3-206ENST00000476217 CTDP1Q9Y5B0 961 aaPredicted RBP6.58□□□□□ -1.36
SSR3-206ENST00000476217 PCDHB6Q9Y5E3 794 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 COL14A1Q05707 1796 aaKnown RBP6.58□□□□□ -1.36
SSR3-206ENST00000476217 DLG5Q8TDM6 1919 aa6.58□□□□□ -1.36
SSR3-206ENST00000476217 CR2P20023 1033 aa6.57□□□□□ -1.36
SSR3-206ENST00000476217 RPS19P39019 145 aaKnown RBP6.57□□□□□ -1.36
SSR3-206ENST00000476217 STAT5BP51692 787 aa6.57□□□□□ -1.36
SSR3-206ENST00000476217 NRG3P56975 720 aa6.57□□□□□ -1.36
SSR3-206ENST00000476217 CALD1Q05682 793 aaKnown RBP6.57□□□□□ -1.36
SSR3-206ENST00000476217 STAT4Q14765 748 aa6.57□□□□□ -1.36
SSR3-206ENST00000476217 SPATS1Q496A3 300 aa6.57□□□□□ -1.36
SSR3-206ENST00000476217 IQSEC1Q6DN90 963 aa6.57□□□□□ -1.36
SSR3-206ENST00000476217 STRA8Q7Z7C7 330 aa6.57□□□□□ -1.36
SSR3-206ENST00000476217 CXorf67Q86X51 503 aaPredicted RBP6.57□□□□□ -1.36
SSR3-206ENST00000476217 ZCRB1Q8TBF4 217 aaKnown RBP6.57□□□□□ -1.36
SSR3-206ENST00000476217 WDR66Q8TBY9 1149 aa6.57□□□□□ -1.36
SSR3-206ENST00000476217 GCDHQ92947 438 aaPredicted RBP6.57□□□□□ -1.36
SSR3-206ENST00000476217 NKD2Q969F2 451 aaPredicted RBP6.57□□□□□ -1.36
SSR3-206ENST00000476217 SLC6A15Q9H2J7 730 aa6.57□□□□□ -1.36
SSR3-206ENST00000476217 MYH16Q9H6N6 1097 aa6.57□□□□□ -1.36
SSR3-206ENST00000476217 OAZ3Q9UMX2 235 aa6.57□□□□□ -1.36
SSR3-206ENST00000476217 PLCH1Q4KWH8 1693 aa6.57□□□□□ -1.36
SSR3-206ENST00000476217 COL5A2P05997 1499 aaPredicted RBP6.56□□□□□ -1.36
SSR3-206ENST00000476217 ELL2O00472 640 aaPredicted RBP6.56□□□□□ -1.36
SSR3-206ENST00000476217 GPR39O43194 453 aa6.56□□□□□ -1.36
SSR3-206ENST00000476217 PFKMP08237 780 aa6.56□□□□□ -1.36
SSR3-206ENST00000476217 MANFP55145 182 aaKnown RBP6.56□□□□□ -1.36
SSR3-206ENST00000476217 EVA1CP58658 441 aa6.56□□□□□ -1.36
SSR3-206ENST00000476217 RNF151Q2KHN1 245 aa6.56□□□□□ -1.36
SSR3-206ENST00000476217 GAGE13Q4V321 117 aa6.56□□□□□ -1.36
SSR3-206ENST00000476217 WDR63Q8IWG1 891 aa6.56□□□□□ -1.36
SSR3-206ENST00000476217 ATL2Q8NHH9 583 aa6.56□□□□□ -1.36
SSR3-206ENST00000476217 RAPGEF4Q8WZA2 1011 aa6.56□□□□□ -1.36
SSR3-206ENST00000476217 SSBP3Q9BWW4 388 aaPredicted RBP6.56□□□□□ -1.36
SSR3-206ENST00000476217 KIAA1683Q9H0B3 1180 aa6.56□□□□□ -1.36
SSR3-206ENST00000476217 MEGF9Q9H1U4 602 aa6.56□□□□□ -1.36
SSR3-206ENST00000476217 SEMA4AQ9H3S1 761 aa6.56□□□□□ -1.36
SSR3-206ENST00000476217 PTPN22Q9Y2R2 807 aa6.56□□□□□ -1.36
SSR3-206ENST00000476217 NCAPD2Q15021 1401 aa6.56□□□□□ -1.36
SSR3-206ENST00000476217 PARP4Q9UKK3 1724 aaKnown RBP6.56□□□□□ -1.36
SSR3-206ENST00000476217 SLFN5Q08AF3 891 aa6.55□□□□□ -1.36
SSR3-206ENST00000476217 MTHFSDQ2M296 383 aaKnown RBP6.55□□□□□ -1.36
SSR3-206ENST00000476217 HS1BP3Q53T59 392 aa6.55□□□□□ -1.36
SSR3-206ENST00000476217 GJC2Q5T442 439 aaPredicted RBP6.55□□□□□ -1.36
SSR3-206ENST00000476217 TOM1L2Q6ZVM7 507 aa6.55□□□□□ -1.36
SSR3-206ENST00000476217 NECAB2Q7Z6G3 386 aa6.55□□□□□ -1.36
SSR3-206ENST00000476217 CLRN3Q8NCR9 226 aa6.55□□□□□ -1.36
SSR3-206ENST00000476217 GIMAP8Q8ND71 665 aaPredicted RBP6.55□□□□□ -1.36
SSR3-206ENST00000476217 CHST13Q8NET6 341 aa6.55□□□□□ -1.36
SSR3-206ENST00000476217 OR14C36Q8NHC7 312 aa6.55□□□□□ -1.36
SSR3-206ENST00000476217 PPP1R14CQ8TAE6 165 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms