RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 SPOUT1Q5T280 376 aaKnown RBP16.55■□□□□ 0.24
SNX13-207ENST00000475800 L1TD1Q5T7N2 865 aaKnown RBP16.55■□□□□ 0.24
SNX13-207ENST00000475800 SLFN12LQ6IEE8 588 aa16.55■□□□□ 0.24
SNX13-207ENST00000475800 TMEM192Q8IY95 271 aa16.55■□□□□ 0.24
SNX13-207ENST00000475800 GRAMD1CQ8IYS0 662 aa16.55■□□□□ 0.24
SNX13-207ENST00000475800 ENGASEQ8NFI3 743 aa16.55■□□□□ 0.24
SNX13-207ENST00000475800 CCDC94Q9BW85 323 aaPredicted RBP16.55■□□□□ 0.24
SNX13-207ENST00000475800 CDT1Q9H211 546 aa16.55■□□□□ 0.24
SNX13-207ENST00000475800 TMEM206Q9H813 350 aa16.55■□□□□ 0.24
SNX13-207ENST00000475800 EXOC1Q9NV70 894 aa16.55■□□□□ 0.24
SNX13-207ENST00000475800 TBC1D7Q9P0N9 293 aa16.55■□□□□ 0.24
SNX13-207ENST00000475800 MRPL42Q9Y6G3 142 aaKnown RBP16.55■□□□□ 0.24
SNX13-207ENST00000475800 UBE4BO95155 1302 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.54■□□□□ 0.24
SNX13-207ENST00000475800 C5orf67F2Z3F1 127 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 KINO60870 393 aaKnown RBP16.54■□□□□ 0.24
SNX13-207ENST00000475800 BMPR1AP36894 532 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 GRM5P41594 1212 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 MATR3P43243 847 aaKnown RBP eCLIP16.54■□□□□ 0.247e-6■■■■□ 23
SNX13-207ENST00000475800 RNASELQ05823 741 aaKnown RBP16.54■□□□□ 0.24
SNX13-207ENST00000475800 MCL1Q07820 350 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 EHHADHQ08426 723 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 SNW1Q13573 536 aaKnown RBP16.54■□□□□ 0.24
SNX13-207ENST00000475800 POSTNQ15063 836 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 ZC2HC1CQ53FD0 456 aaPredicted RBP16.54■□□□□ 0.24
SNX13-207ENST00000475800 ELOA2Q8IYF1 753 aaPredicted RBP16.54■□□□□ 0.24
SNX13-207ENST00000475800 RPS6KC1Q96S38 1066 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 APOL6Q9BWW8 343 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 EPHX3Q9H6B9 360 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 TOPORSQ9NS56 1045 aaPredicted RBP16.54■□□□□ 0.24
SNX13-207ENST00000475800 TYW1Q9NV66 732 aaKnown RBP16.54■□□□□ 0.24
SNX13-207ENST00000475800 ANKFY1Q9P2R3 1169 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 PARP2Q9UGN5 583 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 USP20Q9Y2K6 914 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 HES2Q9Y543 173 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 PCDHB12Q9Y5F1 795 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 BDP1A6H8Y1 2624 aa16.54■□□□□ 0.24
SNX13-207ENST00000475800 MEIS3P2A8K0S8 358 aa16.53■□□□□ 0.24
SNX13-207ENST00000475800 ABLIM1O14639 778 aa16.53■□□□□ 0.24
SNX13-207ENST00000475800 KCNA5P22460 613 aa16.53■□□□□ 0.24
SNX13-207ENST00000475800 CTNNB1P35222 781 aa16.53■□□□□ 0.24
SNX13-207ENST00000475800 YARSP54577 528 aaKnown RBP16.53■□□□□ 0.24
SNX13-207ENST00000475800 EPC2Q52LR7 807 aa16.53■□□□□ 0.24
SNX13-207ENST00000475800 SYCP3Q8IZU3 236 aa16.53■□□□□ 0.24
SNX13-207ENST00000475800 P2RX5Q93086 422 aa16.53■□□□□ 0.24
SNX13-207ENST00000475800 C11orf84Q9BUA3 381 aaPredicted RBP16.53■□□□□ 0.24
SNX13-207ENST00000475800 INPP5FQ9Y2H2 1132 aa16.53■□□□□ 0.24
SNX13-207ENST00000475800 MYO7AQ13402 2215 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 ARL5CA6NH57 179 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 GOLGA6L22H0YM25 854 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 KLRC4O43908 158 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 GADD45BO75293 160 aaPredicted RBP16.52■□□□□ 0.24
SNX13-207ENST00000475800 RECQL4O94761 1208 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 RPN1P04843 607 aaKnown RBP16.52■□□□□ 0.24
SNX13-207ENST00000475800 LINC00271P0C7V0 271 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 MYBP10242 640 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 AKAP5P24588 427 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 CASP1P29466 404 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 PPM1AP35813 382 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 MLH1P40692 756 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 DPYDQ12882 1025 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 ZBTB33Q86T24 672 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 ZBTB45Q96K62 511 aaPredicted RBP16.52■□□□□ 0.24
SNX13-207ENST00000475800 ZNF558Q96NG5 402 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 ACAP3Q96P50 834 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 FAM193BQ96PV7 902 aaPredicted RBP16.52■□□□□ 0.24
SNX13-207ENST00000475800 GAD1Q99259 594 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 CWH43Q9H720 699 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 UBE2ZQ9H832 354 aaPredicted RBP16.52■□□□□ 0.24
SNX13-207ENST00000475800 TBC1D13Q9NVG8 400 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 SNTG2Q9NY99 539 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 STYXL1Q9Y6J8 313 aa16.52■□□□□ 0.24
SNX13-207ENST00000475800 PDCD11Q14690 1871 aaKnown RBP16.51■□□□□ 0.23
SNX13-207ENST00000475800 A0A0B4J269 797 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 OGTO15294 1046 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 PRPF40AO75400 957 aaKnown RBP16.51■□□□□ 0.23
SNX13-207ENST00000475800 NR1I2O75469 434 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 RHOBTB3O94955 611 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 KIF20AO95235 890 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 SMC2O95347 1197 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 CASP5P51878 434 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 SNRPFP62306 86 aaKnown RBP16.51■□□□□ 0.23
SNX13-207ENST00000475800 GRIK3Q13003 919 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 GPM6BQ13491 265 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 KCNB1Q14721 858 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 KMT5BQ4FZB7 885 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 LRRC55Q6ZSA7 311 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 EPM2AIP1Q7L775 607 aaPredicted RBP16.51■□□□□ 0.23
SNX13-207ENST00000475800 THNSL1Q8IYQ7 743 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 COLGALT1Q8NBJ5 622 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 ZNF507Q8TCN5 953 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 KHSRPQ92945 711 aaKnown RBP eCLIP16.51■□□□□ 0.231e-6■■■□□ 16.2
SNX13-207ENST00000475800 GTPBP4Q9BZE4 634 aaKnown RBP16.51■□□□□ 0.23
SNX13-207ENST00000475800 RMND1Q9NWS8 449 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 GDAQ9Y2T3 454 aa16.51■□□□□ 0.23
SNX13-207ENST00000475800 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.51■□□□□ 0.23
SNX13-207ENST00000475800 FAM86C2PA6NEL3 165 aa16.5■□□□□ 0.23
SNX13-207ENST00000475800 H3BNC9 293 aa16.5■□□□□ 0.23
SNX13-207ENST00000475800 H3BQ06 376 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms