RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 PPP2R5CQ13362 524 aa11.67□□□□□ -0.54
CALD1-217ENST00000475772 BMS1Q14692 1282 aaKnown RBP11.67□□□□□ -0.54
CALD1-217ENST00000475772 EARS2Q5JPH6 523 aaKnown RBP11.67□□□□□ -0.54
CALD1-217ENST00000475772 GLB1LQ6UWU2 654 aa11.67□□□□□ -0.54
CALD1-217ENST00000475772 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
CALD1-217ENST00000475772 RNF168Q8IYW5 571 aaPredicted RBP11.67□□□□□ -0.54
CALD1-217ENST00000475772 TDRD5Q8NAT2 981 aaKnown RBP11.67□□□□□ -0.54
CALD1-217ENST00000475772 SMG8Q8ND04 991 aaKnown RBP11.67□□□□□ -0.54
CALD1-217ENST00000475772 PRPF31Q8WWY3 499 aaKnown RBP11.67□□□□□ -0.54
CALD1-217ENST00000475772 ZNF274Q96GC6 653 aaPredicted RBP11.67□□□□□ -0.54
CALD1-217ENST00000475772 ARHGAP9Q9BRR9 750 aa11.67□□□□□ -0.54
CALD1-217ENST00000475772 C22orf23Q9BZE7 217 aa11.67□□□□□ -0.54
CALD1-217ENST00000475772 GJB4Q9NTQ9 266 aa11.67□□□□□ -0.54
CALD1-217ENST00000475772 DDX25Q9UHL0 483 aaKnown RBP11.67□□□□□ -0.54
CALD1-217ENST00000475772 KCNJ14Q9UNX9 436 aa11.67□□□□□ -0.54
CALD1-217ENST00000475772 FAN1Q9Y2M0 1017 aa11.67□□□□□ -0.54
CALD1-217ENST00000475772 COL4A3BPQ9Y5P4 624 aa11.67□□□□□ -0.54
CALD1-217ENST00000475772 ARID2Q68CP9 1835 aa11.67□□□□□ -0.54
CALD1-217ENST00000475772 GVINP1Q7Z2Y8 2422 aa11.67□□□□□ -0.54
CALD1-217ENST00000475772 WDR87Q6ZQQ6 2873 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 DGAT1O75907 488 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 DEXIO95424 95 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 P4HBP07237 508 aaKnown RBP11.66□□□□□ -0.54
CALD1-217ENST00000475772 SRGAP2CP0DJJ0 459 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 NCLP19338 710 aaKnown RBP11.66□□□□□ -0.54
CALD1-217ENST00000475772 KLRC2P26717 231 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 QARSP47897 775 aaKnown RBP11.66□□□□□ -0.54
CALD1-217ENST00000475772 CLCN5P51795 746 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 RNASELQ05823 741 aaKnown RBP11.66□□□□□ -0.54
CALD1-217ENST00000475772 NONOQ15233 471 aaKnown RBP eCLIP11.66□□□□□ -0.54
CALD1-217ENST00000475772 KIAA0319Q5VV43 1072 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 CABP7Q86V35 215 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 PPFIBP1Q86W92 1011 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 COLGALT2Q8IYK4 626 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 PGBD4Q96DM1 585 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 CDK15Q96Q40 435 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 TMEM175Q9BSA9 504 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 PHF20Q9BVI0 1012 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 SFXN1Q9H9B4 322 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 RSAD1Q9HA92 442 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 KCNK12Q9HB15 430 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 RGL1Q9NZL6 768 aa11.66□□□□□ -0.54
CALD1-217ENST00000475772 CARNS1A5YM72 827 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 PRR23AA6NEV1 266 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 FAM187AA6NFU0 413 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 F8W810 466 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 NARSO43776 548 aaKnown RBP11.65□□□□□ -0.54
CALD1-217ENST00000475772 SOD2P04179 222 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 SPIRE1Q08AE8 756 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 LAMTOR4Q0VGL1 99 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 STK3Q13188 491 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 EPHA7Q15375 998 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 LETM2Q2VYF4 491 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 GALNT17Q6IS24 598 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 FERMT3Q86UX7 667 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 C4orf19Q8IY42 314 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 TRIM22Q8IYM9 498 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 RSAD2Q8WXG1 361 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 CEP170P1Q96L14 293 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 FAM20AQ96MK3 541 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 EIF2AQ9BY44 585 aaKnown RBP11.65□□□□□ -0.54
CALD1-217ENST00000475772 XPNPEP1Q9NQW7 623 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 KANSL3Q9P2N6 904 aa11.65□□□□□ -0.54
CALD1-217ENST00000475772 TRIP11Q15643 1979 aa11.65□□□□□ -0.55
CALD1-217ENST00000475772 INPPL1O15357 1258 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 TEX28O15482 410 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 SLITRK3O94933 977 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 PAPLNO95428 1278 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 MYBP10242 640 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 AOC1P19801 751 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 DSC1Q08554 894 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 SCRN1Q12765 414 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 TDGQ13569 410 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 CTTNQ14247 550 aaKnown RBP11.64□□□□□ -0.55
CALD1-217ENST00000475772 PPP4R3AQ6IN85 833 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 C15orf39Q6ZRI6 1047 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 KRT25Q7Z3Z0 450 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 TMEM87AQ8NBN3 555 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 GSTCDQ8NEC7 633 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 PSPC1Q8WXF1 523 aaKnown RBP11.64□□□□□ -0.55
CALD1-217ENST00000475772 DYDC2Q96IM9 177 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 RPS6KC1Q96S38 1066 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 JPH2Q9BR39 696 aaPredicted RBP11.64□□□□□ -0.55
CALD1-217ENST00000475772 HERC2P3Q9BVR0 1158 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 EMILIN2Q9BXX0 1053 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 RXFP1Q9HBX9 757 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 DUSP12Q9UNI6 340 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 HES2Q9Y543 173 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 IPPQ9Y573 584 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 FANCMQ8IYD8 2048 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 NOTCH4Q99466 2003 aa11.64□□□□□ -0.55
CALD1-217ENST00000475772 CNTNAP2Q9UHC6 1331 aa11.63□□□□□ -0.55
CALD1-217ENST00000475772 DNAH14Q0VDD8 3507 aa11.63□□□□□ -0.55
CALD1-217ENST00000475772 CCDC195A0A1B0GUA6 201 aa11.63□□□□□ -0.55
CALD1-217ENST00000475772 KRBA1A5PL33 1030 aa11.63□□□□□ -0.55
CALD1-217ENST00000475772 C2CD2LO14523 706 aa11.63□□□□□ -0.55
CALD1-217ENST00000475772 ASAP2O43150 1006 aa11.63□□□□□ -0.55
CALD1-217ENST00000475772 TSPAN1O60635 241 aa11.63□□□□□ -0.55
CALD1-217ENST00000475772 RFPL2O75678 378 aa11.63□□□□□ -0.55
CALD1-217ENST00000475772 CTDNEP1O95476 244 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms