RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	GDA	Q9Y2T3	454 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	IRAK3	Q9Y616	596 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	TRIP11	Q15643	1979 aa		18.18	■□□□□ 0.5
VPS8-222	ENST00000475580	PPP6R2	O75170	966 aa		18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	FAM13A	O94988	1023 aa		18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	YEATS4	O95619	227 aa		18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	BRD1	O95696	1058 aa		18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	GRM5	P41594	1212 aa		18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	NDUFV1	P49821	464 aa		18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	ZNF568	Q3ZCX4	644 aa		18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	RRAGB	Q5VZM2	374 aa		18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	FOXD4L3	Q6VB84	417 aa	Predicted RBP	18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	HAUS6	Q7Z4H7	955 aa		18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	ZBTB45	Q96K62	511 aa	Predicted RBP	18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	RPS6KC1	Q96S38	1066 aa		18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	PARVG	Q9HBI0	331 aa		18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	CACNG4	Q9UBN1	327 aa		18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	DAXX	Q9UER7	740 aa	Predicted RBP	18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	NCOR1	O75376	2440 aa		18.17	■□□□□ 0.5
VPS8-222	ENST00000475580	MBTPS2	O43462	519 aa		18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	CLASP2	O75122	1294 aa	Known RBP	18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	CXCL14	O95715	111 aa		18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	TXLNA	P40222	546 aa		18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	PTPN14	Q15678	1187 aa		18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	PUS10	Q3MIT2	529 aa	Known RBP	18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	MPZL3	Q6UWV2	235 aa		18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	TMEM184A	Q6ZMB5	413 aa		18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	TAS1R1	Q7RTX1	841 aa		18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	MYCT1	Q8N699	235 aa		18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	RABGGTA	Q92696	567 aa		18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	PAAF1	Q9BRP4	392 aa		18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	PANK2	Q9BZ23	570 aa		18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	CD207	Q9UJ71	328 aa		18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	ZDHHC9	Q9Y397	364 aa		18.16	■□□□□ 0.5
VPS8-222	ENST00000475580	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	MYMK	A6NI61	221 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	MEFV	O15553	781 aa	Predicted RBP	18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	LILRB3	O75022	631 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	SOD2	P04179	222 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	KRT18	P05783	430 aa	Known RBP	18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	MCF2	P10911	925 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	STRN3	Q13033	797 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	COASY	Q13057	564 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	TUSC3	Q13454	348 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	XKR4	Q5GH76	650 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	AXDND1	Q5T1B0	1012 aa	Predicted RBP	18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	ALKAL1	Q6UXT8	129 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	ZPBP2	Q6X784	338 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	CCDC73	Q6ZRK6	1079 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	ZBTB33	Q86T24	672 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	FAM178B	Q8IXR5	827 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	SMRP1	Q8NCR6	262 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	DNAJC19	Q96DA6	116 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	PPP1R10	Q96QC0	940 aa	Known RBP	18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	HERC2P3	Q9BVR0	1158 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	HAPLN2	Q9GZV7	340 aa		18.15	■□□□□ 0.5
VPS8-222	ENST00000475580	FSD2	A1L4K1	749 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580		H0YCG3	227 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580		K7ENM7	598 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	TNFRSF10A	O00220	468 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	TRAK2	O60296	914 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	TBCA	O75347	108 aa	Known RBP	18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	TOM1L1	O75674	476 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	TH	P07101	528 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	DNM1	Q05193	864 aa	Known RBP	18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	SMAD4	Q13485	552 aa	Known RBP	18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	E2F4	Q16254	413 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	LLGL2	Q6P1M3	1020 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	SHC4	Q6S5L8	630 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	SV2B	Q7L1I2	683 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	DYM	Q7RTS9	669 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	DDX12P	Q92771	950 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	COLEC11	Q9BWP8	271 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	CD320	Q9NPF0	282 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	STK39	Q9UEW8	545 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	TBX20	Q9UMR3	447 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	HCFC2	Q9Y5Z7	792 aa		18.14	■□□□□ 0.49
VPS8-222	ENST00000475580	CIT	O14578	2027 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	CASTOR2	A6NHX0	329 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	CUTA	O60888	179 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	NR1I2	O75469	434 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	PIGR	P01833	764 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	HARS	P12081	509 aa	Known RBP	18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	NMT1	P30419	496 aa	Known RBP	18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	CA8	P35219	290 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	STAT6	P42226	847 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	OSTN	P61366	133 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	MCL1	Q07820	350 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	NOLC1	Q14978	699 aa	Known RBP eCLIP	18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	SMAD2	Q15796	467 aa	Known RBP	18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	GLRA4	Q5JXX5	417 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	ATL3	Q6DD88	541 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	ANKRD54	Q6NXT1	300 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	PDILT	Q8N807	584 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	SNX27	Q96L92	541 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	TCHP	Q9BT92	498 aa		18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	CCDC94	Q9BW85	323 aa	Predicted RBP	18.13	■□□□□ 0.49
VPS8-222	ENST00000475580	GPR62	Q9BZJ7	368 aa		18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms