RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 POGKQ9P215 609 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 INTUQ9ULD6 942 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 SPEF1Q9Y4P9 236 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 NDUFS2O75306 463 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 IL2RBP14784 551 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 ANAPC15P60006 121 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 KRT85P78386 507 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 SP140Q13342 867 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 TUBA3CQ13748 450 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 PCBP2Q15366 365 aaKnown RBP eCLIP8.55□□□□□ -1.04
SMC5-203ENST00000475540 PTPN21Q16825 1174 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 BMT2Q1RMZ1 405 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 TUBA3EQ6PEY2 450 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 DRICH1Q6PGQ1 229 aaPredicted RBP8.55□□□□□ -1.04
SMC5-203ENST00000475540 CACTINQ8WUQ7 758 aaKnown RBP8.55□□□□□ -1.04
SMC5-203ENST00000475540 NRG4Q8WWG1 115 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 TFAP2CQ92754 450 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 HOXB13Q92826 284 aaPredicted RBP8.55□□□□□ -1.04
SMC5-203ENST00000475540 FAM193BQ96PV7 902 aaPredicted RBP8.55□□□□□ -1.04
SMC5-203ENST00000475540 C7orf25Q9BPX7 421 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 NDC1Q9BTX1 674 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 LANCL2Q9NS86 450 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 MOCS1Q9NZB8 636 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 EIF2B4Q9UI10 523 aaKnown RBP8.55□□□□□ -1.04
SMC5-203ENST00000475540 SORCS3Q9UPU3 1222 aa8.55□□□□□ -1.04
SMC5-203ENST00000475540 hCG_2014768A0A024R1R8 64 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 LOC105371045A0A1W2PR82 267 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 PJA2O43164 708 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 PCDHGA12O60330 932 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 FZD7O75084 574 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 NCLP19338 710 aaKnown RBP8.54□□□□□ -1.04
SMC5-203ENST00000475540 MGAT1P26572 445 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 SLC16A1P53985 500 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 TOB2Q14106 344 aaPredicted RBP8.54□□□□□ -1.04
SMC5-203ENST00000475540 SEPT2Q15019 361 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 USP51Q70EK9 711 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 FBXO18Q8NFZ0 1043 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 ZFP28Q8NHY6 868 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 STON2Q8WXE9 905 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 MANSC1Q9H8J5 431 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 TMEM140Q9NV12 185 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 PCDHGA9Q9Y5G4 932 aaKnown RBP8.54□□□□□ -1.04
SMC5-203ENST00000475540 PCDHGA8Q9Y5G5 932 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 PCDHGA7Q9Y5G6 932 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 PCDHGA6Q9Y5G7 932 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 PCDHGA3Q9Y5H0 932 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 TNKSO95271 1327 aa8.54□□□□□ -1.04
SMC5-203ENST00000475540 NPIPB8E9PQR5 432 aa8.53□□□□□ -1.04
SMC5-203ENST00000475540 FAM20BO75063 409 aa8.53□□□□□ -1.04
SMC5-203ENST00000475540 PEX11BO96011 259 aa8.53□□□□□ -1.04
SMC5-203ENST00000475540 SNRPA1P09661 255 aaKnown RBP8.53□□□□□ -1.04
SMC5-203ENST00000475540 RRP12Q5JTH9 1297 aaKnown RBP8.53□□□□□ -1.04
SMC5-203ENST00000475540 DPF2Q92785 391 aa8.53□□□□□ -1.04
SMC5-203ENST00000475540 SMAD5Q99717 465 aaKnown RBP8.53□□□□□ -1.04
SMC5-203ENST00000475540 ASPSCR1Q9BZE9 553 aa8.53□□□□□ -1.04
SMC5-203ENST00000475540 CXorf49A8MYA2 514 aaPredicted RBP8.52□□□□□ -1.05
SMC5-203ENST00000475540 SCAF4O95104 1147 aaKnown RBP8.52□□□□□ -1.05
SMC5-203ENST00000475540 ALOX15P16050 662 aaPredicted RBP8.52□□□□□ -1.05
SMC5-203ENST00000475540 C5AR1P21730 350 aa8.52□□□□□ -1.05
SMC5-203ENST00000475540 WASP42768 502 aa8.52□□□□□ -1.05
SMC5-203ENST00000475540 CLRN1P58418 232 aa8.52□□□□□ -1.05
SMC5-203ENST00000475540 IGBP1P78318 339 aa8.52□□□□□ -1.05
SMC5-203ENST00000475540 BRDTQ58F21 947 aaPredicted RBP8.52□□□□□ -1.05
SMC5-203ENST00000475540 EFCAB2Q5VUJ9 269 aa8.52□□□□□ -1.05
SMC5-203ENST00000475540 SLC35B2Q8TB61 432 aa8.52□□□□□ -1.05
SMC5-203ENST00000475540 CPT1CQ8TCG5 803 aa8.52□□□□□ -1.05
SMC5-203ENST00000475540 CCHCR1Q8TD31 782 aa8.52□□□□□ -1.05
SMC5-203ENST00000475540 DCLRE1CQ96SD1 692 aaKnown RBP8.52□□□□□ -1.05
SMC5-203ENST00000475540 SLC13A1Q9BZW2 595 aa8.52□□□□□ -1.05
SMC5-203ENST00000475540 KCNH6Q9H252 994 aa8.52□□□□□ -1.05
SMC5-203ENST00000475540 LDAHQ9H6V9 325 aa8.52□□□□□ -1.05
SMC5-203ENST00000475540 TUBD1Q9UJT1 453 aa8.52□□□□□ -1.05
SMC5-203ENST00000475540 SIK3Q9Y2K2 1263 aa8.52□□□□□ -1.05
SMC5-203ENST00000475540 ATRNL1Q5VV63 1379 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 FZD9O00144 591 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 TRIM24O15164 1050 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 FSHBP01225 129 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 RAP2AP10114 183 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 GUCY1A2P33402 732 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 GDF5P43026 501 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 ATXN7L2Q5T6C5 722 aaPredicted RBP8.51□□□□□ -1.05
SMC5-203ENST00000475540 AFMIDQ63HM1 303 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 RHOT1Q8IXI2 618 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 OR10H5Q8NGA6 315 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 OR2I1PQ8NGU4 316 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 CASKIN2Q8WXE0 1202 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 TEKT5Q96M29 485 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 MRI1Q9BV20 369 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 AJAP1Q9UKB5 411 aaPredicted RBP8.51□□□□□ -1.05
SMC5-203ENST00000475540 REXO2Q9Y3B8 237 aaKnown RBP8.51□□□□□ -1.05
SMC5-203ENST00000475540 HS3ST3A1Q9Y663 406 aa8.51□□□□□ -1.05
SMC5-203ENST00000475540 TEX33O43247 280 aa8.5□□□□□ -1.05
SMC5-203ENST00000475540 APOBEC3AP31941 199 aaPredicted RBP8.5□□□□□ -1.05
SMC5-203ENST00000475540 SLC6A9P48067 706 aa8.5□□□□□ -1.05
SMC5-203ENST00000475540 SLC25A3Q00325 362 aa8.5□□□□□ -1.05
SMC5-203ENST00000475540 MIGA2Q7L4E1 593 aa8.5□□□□□ -1.05
SMC5-203ENST00000475540 Q8N1X5 172 aa8.5□□□□□ -1.05
SMC5-203ENST00000475540 RNF169Q8NCN4 708 aa8.5□□□□□ -1.05
SMC5-203ENST00000475540 HDAC10Q969S8 669 aa8.5□□□□□ -1.05
SMC5-203ENST00000475540 TMPRSS5Q9H3S3 457 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms