RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 CACNG4Q9UBN1 327 aa22.72■■□□□ 1.23
VPS36-203ENST00000475375 POLIQ9UNA4 740 aa22.72■■□□□ 1.23
VPS36-203ENST00000475375 SF3B1O75533 1304 aaKnown RBP eCLIP22.72■■□□□ 1.23
VPS36-203ENST00000475375 LRRN2O75325 713 aa22.71■■□□□ 1.23
VPS36-203ENST00000475375 NTHL1P78549 312 aa22.71■■□□□ 1.23
VPS36-203ENST00000475375 HSP90AA2PQ14568 343 aaPredicted RBP22.71■■□□□ 1.23
VPS36-203ENST00000475375 AMHR2Q16671 573 aa22.71■■□□□ 1.23
VPS36-203ENST00000475375 SLC27A1Q6PCB7 646 aa22.71■■□□□ 1.23
VPS36-203ENST00000475375 PARM1Q6UWI2 310 aa22.71■■□□□ 1.23
VPS36-203ENST00000475375 CEP57Q86XR8 500 aa22.71■■□□□ 1.23
VPS36-203ENST00000475375 SLFN12Q8IYM2 578 aa22.71■■□□□ 1.23
VPS36-203ENST00000475375 DCLK2Q8N568 766 aa22.71■■□□□ 1.23
VPS36-203ENST00000475375 GSTCDQ8NEC7 633 aa22.71■■□□□ 1.23
VPS36-203ENST00000475375 FGF14Q92915 247 aa22.71■■□□□ 1.23
VPS36-203ENST00000475375 CDH7Q9ULB5 785 aa22.71■■□□□ 1.23
VPS36-203ENST00000475375 DNAH14Q0VDD8 3507 aa22.7■■□□□ 1.23
VPS36-203ENST00000475375 POTEMA6NI47 508 aa22.7■■□□□ 1.22
VPS36-203ENST00000475375 KINO60870 393 aaKnown RBP22.7■■□□□ 1.22
VPS36-203ENST00000475375 GLULP15104 373 aa22.7■■□□□ 1.22
VPS36-203ENST00000475375 STARD6P59095 220 aa22.7■■□□□ 1.22
VPS36-203ENST00000475375 POU5F1BQ06416 359 aa22.7■■□□□ 1.22
VPS36-203ENST00000475375 SPIRE1Q08AE8 756 aa22.7■■□□□ 1.22
VPS36-203ENST00000475375 SNW1Q13573 536 aaKnown RBP22.7■■□□□ 1.22
VPS36-203ENST00000475375 PUM1Q14671 1186 aaKnown RBP eCLIP22.7■■□□□ 1.22
VPS36-203ENST00000475375 RTP2Q5QGT7 225 aa22.7■■□□□ 1.22
VPS36-203ENST00000475375 PPM1LQ5SGD2 360 aa22.7■■□□□ 1.22
VPS36-203ENST00000475375 IFNLR1Q8IU57 520 aaPredicted RBP22.7■■□□□ 1.22
VPS36-203ENST00000475375 EIF2AK1Q9BQI3 630 aaKnown RBP22.7■■□□□ 1.22
VPS36-203ENST00000475375 BCO2Q9BYV7 579 aa22.7■■□□□ 1.22
VPS36-203ENST00000475375 SPATA6Q9NWH7 488 aaPredicted RBP22.7■■□□□ 1.22
VPS36-203ENST00000475375 FBXW11Q9UKB1 542 aa22.7■■□□□ 1.22
VPS36-203ENST00000475375 MTCL1Q9Y4B5 1905 aaKnown RBP22.69■■□□□ 1.22
VPS36-203ENST00000475375 CASTOR2A6NHX0 329 aa22.69■■□□□ 1.22
VPS36-203ENST00000475375 CCL16O15467 120 aa22.69■■□□□ 1.22
VPS36-203ENST00000475375 DGAT1O75907 488 aa22.69■■□□□ 1.22
VPS36-203ENST00000475375 CDKL5O76039 1030 aa22.69■■□□□ 1.22
VPS36-203ENST00000475375 SLITRK3O94933 977 aa22.69■■□□□ 1.22
VPS36-203ENST00000475375 UBXN2BQ14CS0 331 aa22.69■■□□□ 1.22
VPS36-203ENST00000475375 MTSS1LQ765P7 747 aa22.69■■□□□ 1.22
VPS36-203ENST00000475375 OXER1Q8TDS5 423 aa22.69■■□□□ 1.22
VPS36-203ENST00000475375 PAAF1Q9BRP4 392 aa22.69■■□□□ 1.22
VPS36-203ENST00000475375 TTPALQ9BTX7 342 aa22.69■■□□□ 1.22
VPS36-203ENST00000475375 OTOGLQ3ZCN5 2332 aa22.69■■□□□ 1.22
VPS36-203ENST00000475375 ARID2Q68CP9 1835 aa22.68■■□□□ 1.22
VPS36-203ENST00000475375 KANSL1LA0AUZ9 987 aa22.68■■□□□ 1.22
VPS36-203ENST00000475375 LAMTOR5O43504 91 aa22.68■■□□□ 1.22
VPS36-203ENST00000475375 XYLBO75191 536 aa22.68■■□□□ 1.22
VPS36-203ENST00000475375 C8AP07357 584 aa22.68■■□□□ 1.22
VPS36-203ENST00000475375 HNRNPA1P09651 372 aaKnown RBP eCLIP22.68■■□□□ 1.22
VPS36-203ENST00000475375 GLRA2P23416 452 aa22.68■■□□□ 1.22
VPS36-203ENST00000475375 ARL2P36404 184 aa22.68■■□□□ 1.22
VPS36-203ENST00000475375 TUSC3Q13454 348 aa22.68■■□□□ 1.22
VPS36-203ENST00000475375 PSMD5Q16401 504 aa22.68■■□□□ 1.22
VPS36-203ENST00000475375 TMEM132AQ24JP5 1023 aa22.68■■□□□ 1.22
VPS36-203ENST00000475375 FAM171A1Q5VUB5 890 aa22.68■■□□□ 1.22
VPS36-203ENST00000475375 POLR3FQ9H1D9 316 aaPredicted RBP22.68■■□□□ 1.22
VPS36-203ENST00000475375 GJB4Q9NTQ9 266 aa22.68■■□□□ 1.22
VPS36-203ENST00000475375 CEP250Q9BV73 2442 aa22.67■■□□□ 1.22
VPS36-203ENST00000475375 A0A1B0GUA9 196 aa22.67■■□□□ 1.22
VPS36-203ENST00000475375 LRRIQ4A6NIV6 560 aa22.67■■□□□ 1.22
VPS36-203ENST00000475375 MLF2Q15773 248 aaPredicted RBP22.67■■□□□ 1.22
VPS36-203ENST00000475375 FGF13Q92913 245 aa22.67■■□□□ 1.22
VPS36-203ENST00000475375 NFKBIZQ9BYH8 718 aa22.67■■□□□ 1.22
VPS36-203ENST00000475375 ANKEF1Q9NU02 776 aa22.67■■□□□ 1.22
VPS36-203ENST00000475375 NCDNQ9UBB6 729 aa22.67■■□□□ 1.22
VPS36-203ENST00000475375 CACNA1IQ9P0X4 2223 aa22.66■■□□□ 1.22
VPS36-203ENST00000475375 ZMYM2Q9UBW7 1377 aa22.66■■□□□ 1.22
VPS36-203ENST00000475375 USO1O60763 962 aaKnown RBP22.66■■□□□ 1.22
VPS36-203ENST00000475375 DTNBO60941 627 aa22.66■■□□□ 1.22
VPS36-203ENST00000475375 KIF4AO95239 1232 aa22.66■■□□□ 1.22
VPS36-203ENST00000475375 MAEAQ7L5Y9 396 aa22.66■■□□□ 1.22
VPS36-203ENST00000475375 SUMF1Q8NBK3 374 aa22.66■■□□□ 1.22
VPS36-203ENST00000475375 PIK3R5Q8WYR1 880 aa22.66■■□□□ 1.22
VPS36-203ENST00000475375 KXD1Q9BQD3 176 aa22.66■■□□□ 1.22
VPS36-203ENST00000475375 CLSTN3Q9BQT9 956 aa22.66■■□□□ 1.22
VPS36-203ENST00000475375 PDRG1Q9NUG6 133 aa22.66■■□□□ 1.22
VPS36-203ENST00000475375 PCDHA12Q9UN75 941 aa22.66■■□□□ 1.22
VPS36-203ENST00000475375 NCOR2Q9Y618 2525 aa22.65■■□□□ 1.22
VPS36-203ENST00000475375 FAM205CA6NFA0 338 aa22.65■■□□□ 1.22
VPS36-203ENST00000475375 PRKCQQ04759 706 aa22.65■■□□□ 1.22
VPS36-203ENST00000475375 CSTF1Q05048 431 aaKnown RBP22.65■■□□□ 1.22
VPS36-203ENST00000475375 SLC44A4Q53GD3 710 aa22.65■■□□□ 1.22
VPS36-203ENST00000475375 EARS2Q5JPH6 523 aaKnown RBP22.65■■□□□ 1.22
VPS36-203ENST00000475375 MAML2Q8IZL2 1156 aaPredicted RBP22.65■■□□□ 1.22
VPS36-203ENST00000475375 ITFG1Q8TB96 612 aa22.65■■□□□ 1.22
VPS36-203ENST00000475375 LNX1Q8TBB1 728 aaPredicted RBP22.65■■□□□ 1.22
VPS36-203ENST00000475375 SLC7A14Q8TBB6 771 aa22.65■■□□□ 1.22
VPS36-203ENST00000475375 PIGOQ8TEQ8 1089 aa22.65■■□□□ 1.22
VPS36-203ENST00000475375 GPR179Q6PRD1 2367 aa22.64■■□□□ 1.22
VPS36-203ENST00000475375 A0A087WWV3 80 aa22.64■■□□□ 1.21
VPS36-203ENST00000475375 FAM170BA6NMN3 283 aa22.64■■□□□ 1.21
VPS36-203ENST00000475375 LYPLA2O95372 231 aa22.64■■□□□ 1.21
VPS36-203ENST00000475375 THP07101 528 aa22.64■■□□□ 1.21
VPS36-203ENST00000475375 RARRES1P49788 294 aa22.64■■□□□ 1.21
VPS36-203ENST00000475375 PFKPQ01813 784 aa22.64■■□□□ 1.21
VPS36-203ENST00000475375 SCRN1Q12765 414 aa22.64■■□□□ 1.21
VPS36-203ENST00000475375 ELAVL2Q12926 359 aaKnown RBP22.64■■□□□ 1.21
VPS36-203ENST00000475375 CALCRLQ16602 461 aa22.64■■□□□ 1.21
VPS36-203ENST00000475375 RSPO4Q2I0M5 234 aaPredicted RBP22.64■■□□□ 1.21
VPS36-203ENST00000475375 ZNF528Q3MIS6 628 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms