RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 IFNAR1P17181 557 aa15.73■□□□□ 0.11
ATG9A-220ENST00000475339 SFPQP23246 707 aaKnown RBP eCLIP15.73■□□□□ 0.11
ATG9A-220ENST00000475339 GAS6Q14393 721 aa15.73■□□□□ 0.11
ATG9A-220ENST00000475339 PFKFB3Q16875 520 aaPredicted RBP15.73■□□□□ 0.11
ATG9A-220ENST00000475339 LONP2Q86WA8 852 aa15.73■□□□□ 0.11
ATG9A-220ENST00000475339 NPAS3Q8IXF0 933 aa15.73■□□□□ 0.11
ATG9A-220ENST00000475339 RNF26Q9BY78 433 aaPredicted RBP15.73■□□□□ 0.11
ATG9A-220ENST00000475339 GLT8D2Q9H1C3 349 aa15.73■□□□□ 0.11
ATG9A-220ENST00000475339 SMOC1Q9H4F8 434 aa15.73■□□□□ 0.11
ATG9A-220ENST00000475339 RSAD1Q9HA92 442 aa15.73■□□□□ 0.11
ATG9A-220ENST00000475339 BARHL2Q9NY43 387 aa15.73■□□□□ 0.11
ATG9A-220ENST00000475339 LOC400499M0QZD8 3231 aa15.73■□□□□ 0.11
ATG9A-220ENST00000475339 MYH9P35579 1960 aaKnown RBP15.73■□□□□ 0.11
ATG9A-220ENST00000475339 GREB1Q4ZG55 1949 aa15.72■□□□□ 0.11
ATG9A-220ENST00000475339 A0A087WZ62 844 aa15.72■□□□□ 0.11
ATG9A-220ENST00000475339 MAN2B1O00754 1011 aa15.72■□□□□ 0.11
ATG9A-220ENST00000475339 CCL16O15467 120 aa15.72■□□□□ 0.11
ATG9A-220ENST00000475339 PRPF3O43395 683 aaKnown RBP15.72■□□□□ 0.11
ATG9A-220ENST00000475339 ECI2O75521 394 aa15.72■□□□□ 0.11
ATG9A-220ENST00000475339 RBM25P49756 843 aaKnown RBP15.72■□□□□ 0.11
ATG9A-220ENST00000475339 SSRP1Q08945 709 aaKnown RBP15.72■□□□□ 0.11
ATG9A-220ENST00000475339 ZNF252P-AS1Q0IIN9 211 aa15.72■□□□□ 0.11
ATG9A-220ENST00000475339 COLGALT2Q8IYK4 626 aa15.72■□□□□ 0.11
ATG9A-220ENST00000475339 ING5Q8WYH8 240 aa15.72■□□□□ 0.11
ATG9A-220ENST00000475339 MBOAT7Q96N66 472 aa15.72■□□□□ 0.11
ATG9A-220ENST00000475339 FDXACB1Q9BRP7 624 aaPredicted RBP15.72■□□□□ 0.11
ATG9A-220ENST00000475339 SCNM1Q9BWG6 230 aa15.72■□□□□ 0.11
ATG9A-220ENST00000475339 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.72■□□□□ 0.11
ATG9A-220ENST00000475339 TPCN1Q9ULQ1 816 aa15.72■□□□□ 0.11
ATG9A-220ENST00000475339 SMCO2A6NFE2 343 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 K7ESF4 209 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 HNRNPA1P09651 372 aaKnown RBP eCLIP15.71■□□□□ 0.11
ATG9A-220ENST00000475339 HOXC13P31276 330 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 ZNF76P36508 570 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 NTRK3Q16288 839 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 PPM1LQ5SGD2 360 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 TEX2Q8IWB9 1127 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 CCDC148Q8NFR7 591 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 DNASE1L2Q92874 299 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 KIF12Q96FN5 646 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 FAM167AQ96KS9 214 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 GPR62Q9BZJ7 368 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 RIC8AQ9NPQ8 531 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 HCFC1R1Q9NWW0 138 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 FNIP2Q9P278 1114 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 FBXW11Q9UKB1 542 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 LAMA5O15230 3695 aa15.71■□□□□ 0.11
ATG9A-220ENST00000475339 NAV2Q8IVL1 2488 aa15.71■□□□□ 0.1
ATG9A-220ENST00000475339 FAM86B1E9PN63 330 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 IPO5O00410 1097 aaKnown RBP15.7■□□□□ 0.1
ATG9A-220ENST00000475339 PFKFB2O60825 505 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 C8AP07357 584 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 PSAPP07602 524 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 FAM86B2P0C5J1 330 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 SCRN1Q12765 414 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 RNF43Q68DV7 783 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 TANGO2Q6ICL3 276 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 TYW1BQ6NUM6 668 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 POTEHQ6S545 545 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 CATSPER4Q7RTX7 472 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 MRPL10Q7Z7H8 261 aaKnown RBP15.7■□□□□ 0.1
ATG9A-220ENST00000475339 PLA2G4DQ86XP0 818 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 FAM3CQ92520 227 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 MCRS1Q96EZ8 462 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 C6orf50Q9HD87 102 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 PCDHA10Q9Y5I2 948 aa15.7■□□□□ 0.1
ATG9A-220ENST00000475339 ITPR1Q14643 2758 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 ZNF862O60290 1169 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 DEXIO95424 95 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 OATP04181 439 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 CHRNB1P11230 501 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 GNA11P29992 359 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 GRM2Q14416 872 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 USP41Q3LFD5 358 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 LIN9Q5TKA1 542 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 ZNF746Q6NUN9 644 aaPredicted RBP15.69■□□□□ 0.1
ATG9A-220ENST00000475339 PRSS55Q6UWB4 352 aaPredicted RBP15.69■□□□□ 0.1
ATG9A-220ENST00000475339 SPEM1Q8N4L4 309 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 ANO3Q9BYT9 981 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 BRD9Q9H8M2 597 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 NRBP2Q9NSY0 501 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 C2orf42Q9NWW7 574 aa15.69■□□□□ 0.1
ATG9A-220ENST00000475339 CNTNAP2Q9UHC6 1331 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 ESYT2A0FGR8 921 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 XYLBO75191 536 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 FOSP01100 380 aaPredicted RBP15.68■□□□□ 0.1
ATG9A-220ENST00000475339 CDC42EP1Q00587 391 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 DSC1Q08554 894 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 AP3B2Q13367 1082 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 PABPC1LQ4VXU2 614 aaKnown RBP15.68■□□□□ 0.1
ATG9A-220ENST00000475339 TCEAL6Q6IPX3 200 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 FUT10Q6P4F1 479 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 NIPA1Q7RTP0 329 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 SMAP1Q8IYB5 467 aaPredicted RBP15.68■□□□□ 0.1
ATG9A-220ENST00000475339 REXO1Q8N1G1 1221 aaKnown RBP15.68■□□□□ 0.1
ATG9A-220ENST00000475339 BICD2Q8TD16 824 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 TCEAL3Q969E4 200 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 LOXL4Q96JB6 756 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 COLEC11Q9BWP8 271 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 INO80BQ9C086 356 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms