RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 RARS2Q5T160 578 aaKnown RBP13.06□□□□□ -0.32
CLIP2-204ENST00000474962 RRAGBQ5VZM2 374 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 CES5AQ6NT32 575 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 TRIM67Q6ZTA4 783 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 GSTCDQ8NEC7 633 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 BSNDQ8WZ55 320 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 RABGGTAQ92696 567 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 EPSTI1Q96J88 318 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 KLHL5Q96PQ7 755 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 TMEM175Q9BSA9 504 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 TRIM6Q9C030 488 aaPredicted RBP13.06□□□□□ -0.32
CLIP2-204ENST00000474962 CCSER1Q9C0I3 900 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 NXF3Q9H4D5 531 aaKnown RBP13.06□□□□□ -0.32
CLIP2-204ENST00000474962 POMKQ9H5K3 350 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 GDPD2Q9HCC8 539 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 KLK14Q9P0G3 267 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 PRG3Q9Y2Y8 225 aaPredicted RBP13.06□□□□□ -0.32
CLIP2-204ENST00000474962 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 TMEM221A6NGB7 291 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 M0R296 226 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 CYP11B2P19099 503 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 KLRC2P26717 231 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 ITIH3Q06033 890 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 KARSQ15046 597 aaKnown RBP13.05□□□□□ -0.32
CLIP2-204ENST00000474962 ADALQ6DHV7 355 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 TMC5Q6UXY8 1006 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 CCDC73Q6ZRK6 1079 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 PLCD3Q8N3E9 789 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 MCPH1Q8NEM0 835 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 CCDC51Q96ER9 411 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 GBP4Q96PP9 640 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 PYM1Q9BRP8 204 aaKnown RBP13.05□□□□□ -0.32
CLIP2-204ENST00000474962 PANK2Q9BZ23 570 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 FZD8Q9H461 694 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 MARCH5Q9NX47 278 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 PARP2Q9UGN5 583 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 GIT1Q9Y2X7 761 aa13.05□□□□□ -0.32
CLIP2-204ENST00000474962 E9PMD0 336 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 INPPL1O15357 1258 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 EFEMP2O95967 443 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 MYBP10242 640 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 STAT6P42226 847 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 DSC1Q08554 894 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 ATAT1Q5SQI0 421 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 KIAA0319Q5VV43 1072 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 SLC27A1Q6PCB7 646 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 PDILTQ8N807 584 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 PBXIP1Q96AQ6 731 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 B3GALT6Q96L58 329 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 MFSD14AQ96MC6 490 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 MMTAG2Q9BU76 263 aaKnown RBP13.04□□□□□ -0.32
CLIP2-204ENST00000474962 CXCL16Q9H2A7 254 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 BHMT2Q9H2M3 363 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 MRPL17Q9NRX2 175 aaKnown RBP13.04□□□□□ -0.32
CLIP2-204ENST00000474962 CACNG4Q9UBN1 327 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 MYO10Q9HD67 2058 aa13.04□□□□□ -0.32
CLIP2-204ENST00000474962 C2CD4DB7Z1M9 353 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 GOLGA6L22H0YM25 854 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 SOD2P04179 222 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 LIG1P18858 919 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 PLCG1P19174 1290 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 CMA1P23946 247 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 CLCN4P51793 760 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 DHX8Q14562 1220 aaKnown RBP13.03□□□□□ -0.32
CLIP2-204ENST00000474962 HYIQ5T013 277 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 AXDND1Q5T1B0 1012 aaPredicted RBP13.03□□□□□ -0.32
CLIP2-204ENST00000474962 IER5LQ5T953 404 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 RESP18Q5W5W9 173 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 CDCA2Q69YH5 1023 aaPredicted RBP13.03□□□□□ -0.32
CLIP2-204ENST00000474962 USP49Q70CQ1 688 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 IQUBQ8NA54 791 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 FBXL18Q96ME1 805 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 NECTIN4Q96NY8 510 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 PNMA5Q96PV4 448 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 RPS6KC1Q96S38 1066 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 KIFC3Q9BVG8 833 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 EMILIN2Q9BXX0 1053 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 GPR62Q9BZJ7 368 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 PRMT7Q9NVM4 692 aaPredicted RBP13.03□□□□□ -0.32
CLIP2-204ENST00000474962 STK17AQ9UEE5 414 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 LIMD1Q9UGP4 676 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 ARID2Q68CP9 1835 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 WDR87Q6ZQQ6 2873 aa13.03□□□□□ -0.32
CLIP2-204ENST00000474962 TEX28O15482 410 aa13.02□□□□□ -0.33
CLIP2-204ENST00000474962 EDN1P05305 212 aa13.02□□□□□ -0.33
CLIP2-204ENST00000474962 KRT18P05783 430 aaKnown RBP13.02□□□□□ -0.33
CLIP2-204ENST00000474962 PLA2G4BP0C869 781 aa13.02□□□□□ -0.33
CLIP2-204ENST00000474962 SPATA31D3P0C874 917 aa13.02□□□□□ -0.33
CLIP2-204ENST00000474962 MTHFRP42898 656 aa13.02□□□□□ -0.33
CLIP2-204ENST00000474962 PRPF4BQ13523 1007 aaKnown RBP13.02□□□□□ -0.33
CLIP2-204ENST00000474962 PTPN21Q16825 1174 aa13.02□□□□□ -0.33
CLIP2-204ENST00000474962 FAM187BQ17R55 369 aa13.02□□□□□ -0.33
CLIP2-204ENST00000474962 TMEM119Q4V9L6 283 aa13.02□□□□□ -0.33
CLIP2-204ENST00000474962 SHC4Q6S5L8 630 aa13.02□□□□□ -0.33
CLIP2-204ENST00000474962 SPATA31D4Q6ZUB0 917 aa13.02□□□□□ -0.33
CLIP2-204ENST00000474962 SV2BQ7L1I2 683 aa13.02□□□□□ -0.33
CLIP2-204ENST00000474962 PPFIBP1Q86W92 1011 aa13.02□□□□□ -0.33
CLIP2-204ENST00000474962 ZBTB8OSQ8IWT0 167 aa13.02□□□□□ -0.33
CLIP2-204ENST00000474962 HACE1Q8IYU2 909 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms