RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 MAEAQ7L5Y9 396 aa17.32■□□□□ 0.36
SRRT-209ENST00000474896 GPR65Q8IYL9 337 aa17.32■□□□□ 0.36
SRRT-209ENST00000474896 ST13P5Q8NFI4 369 aaPredicted RBP17.32■□□□□ 0.36
SRRT-209ENST00000474896 TNFRSF25Q93038 417 aa17.32■□□□□ 0.36
SRRT-209ENST00000474896 TBC1D32Q96NH3 1257 aa17.32■□□□□ 0.36
SRRT-209ENST00000474896 POLR3FQ9H1D9 316 aaPredicted RBP17.32■□□□□ 0.36
SRRT-209ENST00000474896 BRMS1Q9HCU9 246 aa17.32■□□□□ 0.36
SRRT-209ENST00000474896 ZDHHC7Q9NXF8 308 aa17.32■□□□□ 0.36
SRRT-209ENST00000474896 CACNG4Q9UBN1 327 aa17.32■□□□□ 0.36
SRRT-209ENST00000474896 DOCK8Q8NF50 2099 aa17.32■□□□□ 0.36
SRRT-209ENST00000474896 FOXK2Q01167 660 aa17.31■□□□□ 0.36
SRRT-209ENST00000474896 GRIK3Q13003 919 aa17.31■□□□□ 0.36
SRRT-209ENST00000474896 PRSS55Q6UWB4 352 aaPredicted RBP17.31■□□□□ 0.36
SRRT-209ENST00000474896 GET4Q7L5D6 327 aaPredicted RBP17.31■□□□□ 0.36
SRRT-209ENST00000474896 GPR152Q8TDT2 470 aa17.31■□□□□ 0.36
SRRT-209ENST00000474896 TBC1D17Q9HA65 648 aa17.31■□□□□ 0.36
SRRT-209ENST00000474896 LRRIQ4A6NIV6 560 aa17.3■□□□□ 0.36
SRRT-209ENST00000474896 BTBD18B2RXH4 712 aa17.3■□□□□ 0.36
SRRT-209ENST00000474896 USO1O60763 962 aaKnown RBP17.3■□□□□ 0.36
SRRT-209ENST00000474896 ZMYND10O75800 440 aa17.3■□□□□ 0.36
SRRT-209ENST00000474896 XRCC6P12956 609 aaKnown RBP eCLIP17.3■□□□□ 0.36
SRRT-209ENST00000474896 CREMQ03060 361 aa17.3■□□□□ 0.36
SRRT-209ENST00000474896 HSP90AA2PQ14568 343 aaPredicted RBP17.3■□□□□ 0.36
SRRT-209ENST00000474896 NECAB1Q8N987 351 aa17.3■□□□□ 0.36
SRRT-209ENST00000474896 PAAF1Q9BRP4 392 aa17.3■□□□□ 0.36
SRRT-209ENST00000474896 GPRC5CQ9NQ84 441 aa17.3■□□□□ 0.36
SRRT-209ENST00000474896 DOCK6Q96HP0 2047 aa17.3■□□□□ 0.36
SRRT-209ENST00000474896 ANHXE9PGG2 379 aa17.29■□□□□ 0.36
SRRT-209ENST00000474896 WNT7AO00755 349 aa17.29■□□□□ 0.36
SRRT-209ENST00000474896 SPECC1Q5M775 1068 aa17.29■□□□□ 0.36
SRRT-209ENST00000474896 RTP2Q5QGT7 225 aa17.29■□□□□ 0.36
SRRT-209ENST00000474896 CEP57Q86XR8 500 aa17.29■□□□□ 0.36
SRRT-209ENST00000474896 KCNG4Q8TDN1 519 aa17.29■□□□□ 0.36
SRRT-209ENST00000474896 HASPINQ8TF76 798 aa17.29■□□□□ 0.36
SRRT-209ENST00000474896 MTMR9Q96QG7 549 aa17.29■□□□□ 0.36
SRRT-209ENST00000474896 KIF2CQ99661 725 aa17.29■□□□□ 0.36
SRRT-209ENST00000474896 SF3B1O75533 1304 aaKnown RBP eCLIP17.28■□□□□ 0.36
SRRT-209ENST00000474896 CASTOR2A6NHX0 329 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 NEMFO60524 1076 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 DCNP07585 359 aaKnown RBP17.28■□□□□ 0.36
SRRT-209ENST00000474896 SPATA31C1P0DKV0 1188 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 ATP2B1P20020 1258 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 FSHRP23945 695 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 ID4P47928 161 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 TUSC3Q13454 348 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 HTR4Q13639 388 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 ANKRD1Q15327 319 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 FAM171A1Q5VUB5 890 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 PHLDB3Q6NSJ2 640 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 GRASPQ7Z6J2 395 aaPredicted RBP17.28■□□□□ 0.36
SRRT-209ENST00000474896 CLSTN3Q9BQT9 956 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 TTPALQ9BTX7 342 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 RPP25Q9BUL9 199 aaKnown RBP17.28■□□□□ 0.36
SRRT-209ENST00000474896 FZD8Q9H461 694 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 PRMT7Q9NVM4 692 aaPredicted RBP17.28■□□□□ 0.36
SRRT-209ENST00000474896 SNTG2Q9NY99 539 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 SIT1Q9Y3P8 196 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 NUMBLQ9Y6R0 609 aa17.28■□□□□ 0.36
SRRT-209ENST00000474896 POTEMA6NI47 508 aa17.27■□□□□ 0.36
SRRT-209ENST00000474896 TTLL13PA6NNM8 815 aa17.27■□□□□ 0.36
SRRT-209ENST00000474896 THP07101 528 aa17.27■□□□□ 0.36
SRRT-209ENST00000474896 FOSBP53539 338 aa17.27■□□□□ 0.36
SRRT-209ENST00000474896 ME3Q16798 604 aa17.27■□□□□ 0.36
SRRT-209ENST00000474896 DCLRE1AQ6PJP8 1040 aa17.27■□□□□ 0.36
SRRT-209ENST00000474896 CATSPER3Q86XQ3 398 aa17.27■□□□□ 0.36
SRRT-209ENST00000474896 ZBTB8OSQ8IWT0 167 aa17.27■□□□□ 0.36
SRRT-209ENST00000474896 LNX1Q8TBB1 728 aaPredicted RBP17.27■□□□□ 0.36
SRRT-209ENST00000474896 PRIMPOLQ96LW4 560 aa17.27■□□□□ 0.36
SRRT-209ENST00000474896 CXCL16Q9H2A7 254 aa17.27■□□□□ 0.36
SRRT-209ENST00000474896 ARHGEF3Q9NR81 526 aa17.27■□□□□ 0.36
SRRT-209ENST00000474896 SLC2A4RGQ9NR83 387 aa17.27■□□□□ 0.36
SRRT-209ENST00000474896 R4GN57 208 aa17.27■□□□□ 0.36
SRRT-209ENST00000474896 ZMYM2Q9UBW7 1377 aa17.27■□□□□ 0.35
SRRT-209ENST00000474896 PTGESO14684 152 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 KIF4AO95239 1232 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 LMNAP02545 664 aaKnown RBP17.26■□□□□ 0.35
SRRT-209ENST00000474896 GPC5P78333 572 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 NTHL1P78549 312 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 FAM187BQ17R55 369 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 TMEM132AQ24JP5 1023 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 CDCA2Q69YH5 1023 aaPredicted RBP17.26■□□□□ 0.35
SRRT-209ENST00000474896 PARM1Q6UWI2 310 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 DIS3L2Q8IYB7 885 aaKnown RBP17.26■□□□□ 0.35
SRRT-209ENST00000474896 MCPH1Q8NEM0 835 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 PIK3R5Q8WYR1 880 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 TMEM60Q9H2L4 133 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 SEMA4AQ9H3S1 761 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 PDZD7Q9H5P4 517 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 FBXW11Q9UKB1 542 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 USP20Q9Y2K6 914 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 ZFP37Q9Y6Q3 630 aaPredicted RBP17.26■□□□□ 0.35
SRRT-209ENST00000474896 VPS13AQ96RL7 3174 aa17.26■□□□□ 0.35
SRRT-209ENST00000474896 N4BP3O15049 544 aa17.25■□□□□ 0.35
SRRT-209ENST00000474896 CCL16O15467 120 aa17.25■□□□□ 0.35
SRRT-209ENST00000474896 ADAM12O43184 909 aa17.25■□□□□ 0.35
SRRT-209ENST00000474896 MED24O75448 989 aa17.25■□□□□ 0.35
SRRT-209ENST00000474896 LARGE1O95461 756 aa17.25■□□□□ 0.35
SRRT-209ENST00000474896 HNRNPA1P09651 372 aaKnown RBP eCLIP17.25■□□□□ 0.35
SRRT-209ENST00000474896 LIG1P18858 919 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms