RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 SEZ6Q53EL9 994 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 CDKAL1Q5VV42 579 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 ARMCX5Q6P1M9 558 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 MRPL10Q7Z7H8 261 aaKnown RBP10.92□□□□□ -0.66
COL8A1-206ENST00000474648 TMEM192Q8IY95 271 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 TMEM199Q8N511 208 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 CEP120Q8N960 986 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 XXYLT1Q8NBI6 393 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 SMG8Q8ND04 991 aaKnown RBP10.92□□□□□ -0.66
COL8A1-206ENST00000474648 APBB2Q92870 758 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 BADQ92934 168 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 SAAL1Q96ER3 474 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 ADAM2Q99965 735 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 MSTO1Q9BUK6 570 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 THAP9Q9H5L6 903 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 RYDENQ9NUL5 291 aaKnown RBP10.92□□□□□ -0.66
COL8A1-206ENST00000474648 ANKFY1Q9P2R3 1169 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 CPSF3Q9UKF6 684 aaKnown RBP10.92□□□□□ -0.66
COL8A1-206ENST00000474648 ZMYND8Q9ULU4 1186 aaPredicted RBP10.92□□□□□ -0.66
COL8A1-206ENST00000474648 MKI67P46013 3256 aaKnown RBP10.92□□□□□ -0.66
COL8A1-206ENST00000474648 A0A0U1RQF3 1178 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 C9IYK1 514 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 EXOC3O60645 756 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 ZNF623O75123 536 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 ADRB2P07550 413 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 STAG3L1P0CL83 205 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 SYN1P17600 705 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 TNFSF9P41273 254 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 GRM5P41594 1212 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 ACOT2P49753 483 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 EPHB4P54760 987 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 WNT7BP56706 349 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 ZNF568Q3ZCX4 644 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 LCE2DQ5TA82 110 aaPredicted RBP10.91□□□□□ -0.66
COL8A1-206ENST00000474648 TWF2Q6IBS0 349 aaKnown RBP10.91□□□□□ -0.66
COL8A1-206ENST00000474648 ZNF598Q86UK7 904 aaKnown RBP10.91□□□□□ -0.66
COL8A1-206ENST00000474648 CBWD2Q8IUF1 395 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 THNSL1Q8IYQ7 743 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 RPUSD2Q8IZ73 545 aaKnown RBP10.91□□□□□ -0.66
COL8A1-206ENST00000474648 CRIPAKQ8N1N5 446 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 GPD1LQ8N335 351 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 RDH13Q8NBN7 331 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 RNF214Q8ND24 703 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 PLEKHO2Q8TD55 490 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 NOC3LQ8WTT2 800 aaKnown RBP10.91□□□□□ -0.66
COL8A1-206ENST00000474648 MFSD14AQ96MC6 490 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 FAM213AQ9BRX8 229 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 FTHL17Q9BXU8 183 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 KIAA1586Q9HCI6 787 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 IL23AQ9NPF7 189 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 FAM105AQ9NUU6 356 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 SNTG2Q9NY99 539 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 PRKAG2Q9UGJ0 569 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 HES2Q9Y543 173 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 IPPQ9Y573 584 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 PCDHB2Q9Y5E7 798 aa10.91□□□□□ -0.66
COL8A1-206ENST00000474648 MYH11P35749 1972 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.9□□□□□ -0.66
COL8A1-206ENST00000474648 ZNF233A6NK53 670 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 BECN2A8MW95 431 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 MAPK13O15264 365 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 SLC16A3O15427 465 aaKnown RBP10.9□□□□□ -0.66
COL8A1-206ENST00000474648 FGFR1OPO95684 399 aaKnown RBP10.9□□□□□ -0.66
COL8A1-206ENST00000474648 LDHAP00338 332 aaKnown RBP10.9□□□□□ -0.66
COL8A1-206ENST00000474648 CLTAP09496 248 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 ACRP10323 421 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 ATF7P17544 494 aaPredicted RBP10.9□□□□□ -0.66
COL8A1-206ENST00000474648 PSMC2P35998 433 aaKnown RBP10.9□□□□□ -0.66
COL8A1-206ENST00000474648 MATR3P43243 847 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL8A1-206ENST00000474648 RGS19P49795 217 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 MARSP56192 900 aaKnown RBP10.9□□□□□ -0.66
COL8A1-206ENST00000474648 OSTNP61366 133 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 POU5F1Q01860 360 aaKnown RBP10.9□□□□□ -0.66
COL8A1-206ENST00000474648 ENOX2Q16206 610 aaKnown RBP10.9□□□□□ -0.66
COL8A1-206ENST00000474648 SNRNP35Q16560 246 aaKnown RBP10.9□□□□□ -0.66
COL8A1-206ENST00000474648 SLC10A6Q3KNW5 377 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 C1orf220Q5T0J3 134 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 CEP135Q66GS9 1140 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 CNKSR3Q6P9H4 555 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 ALKAL1Q6UXT8 129 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 SLC24A5Q71RS6 500 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 FRMD5Q7Z6J6 570 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 ECHDC2Q86YB7 292 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 ADPGKQ9BRR6 497 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 MKNK1Q9BUB5 465 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 CXCL16Q9H2A7 254 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 NXF3Q9H4D5 531 aaKnown RBP10.9□□□□□ -0.66
COL8A1-206ENST00000474648 SIP14410 1827 aa10.9□□□□□ -0.66
COL8A1-206ENST00000474648 LRRC10BA6NIK2 292 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 MEIS3P2A8K0S8 358 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 GNA14O95837 355 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 PFKMP08237 780 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 ATP1A3P13637 1013 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 AKAP5P24588 427 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 FPGSQ05932 587 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 CYP24A1Q07973 514 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 PPIGQ13427 754 aaKnown RBP eCLIP10.89□□□□□ -0.67
COL8A1-206ENST00000474648 IKBKEQ14164 716 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 KYAT1Q16773 422 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 TPD52L1Q16890 204 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms