RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 NLRP11P59045 1033 aaKnown RBP10.58□□□□□ -0.72
USP39-214ENST00000474572 ERVK-9P63128 1117 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 CDR2Q01850 454 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 GRM1Q13255 1194 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 SNAPC2Q13487 334 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 KCTD2Q14681 263 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 SMC1AQ14683 1233 aaKnown RBP10.58□□□□□ -0.72
USP39-214ENST00000474572 LY6KQ17RY6 165 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 C8orf74Q6P047 294 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 PEX26Q7Z412 305 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 PPM1KQ8N3J5 372 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 METTL13Q8N6R0 699 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 EIF1ADQ8N9N8 165 aaKnown RBP10.58□□□□□ -0.72
USP39-214ENST00000474572 TCP11Q8WWU5 503 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 CCDC127Q96BQ5 260 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 BICD1Q96G01 975 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 PCDHB18PQ96TA0 734 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 POP1Q99575 1024 aaKnown RBP10.58□□□□□ -0.72
USP39-214ENST00000474572 CGRRF1Q99675 332 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 FAM213AQ9BRX8 229 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 SELENOOQ9BVL4 669 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 THAP2Q9H0W7 228 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 SUGCTQ9HAC7 445 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 OSGEPQ9NPF4 335 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 GDF3Q9NR23 364 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 RNF216Q9NWF9 866 aaPredicted RBP10.58□□□□□ -0.72
USP39-214ENST00000474572 STIM2Q9P246 746 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 AMFRQ9UKV5 643 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 AGO2Q9UKV8 859 aaKnown RBP10.58□□□□□ -0.72
USP39-214ENST00000474572 PNMA3Q9UL41 463 aa10.58□□□□□ -0.72
USP39-214ENST00000474572 RBM47A0AV96 593 aaKnown RBP10.57□□□□□ -0.72
USP39-214ENST00000474572 IQCA1LA6NCM1 817 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 LRRIQ4A6NIV6 560 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 ASB14A6NK59 587 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 CCDC188H7C350 402 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 ABLIM1O14639 778 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 KCNK3O14649 394 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 FAM189A1O60320 539 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 MSCO60682 206 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 VNN1O95497 513 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 PGK2P07205 417 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 CYP11B1P15538 503 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 OAS2P29728 719 aaKnown RBP10.57□□□□□ -0.72
USP39-214ENST00000474572 EFNA5P52803 228 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 TNNC1P63316 161 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 GPC5P78333 572 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 MKRN4PQ13434 485 aaPredicted RBP10.57□□□□□ -0.72
USP39-214ENST00000474572 TTLL12Q14166 644 aaPredicted RBP10.57□□□□□ -0.72
USP39-214ENST00000474572 PLCB4Q15147 1175 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 ZNF792Q3KQV3 632 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 HSDL1Q3SXM5 330 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 TDRD10Q5VZ19 366 aaKnown RBP10.57□□□□□ -0.72
USP39-214ENST00000474572 ZNF677Q86XU0 584 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 BRSK2Q8IWQ3 736 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 HDAC7Q8WUI4 952 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 TATDN2Q93075 761 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 CAVIN3Q969G5 261 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 JPH2Q9BR39 696 aaPredicted RBP10.57□□□□□ -0.72
USP39-214ENST00000474572 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.57□□□□□ -0.722e-19■■□□□ 13.5
USP39-214ENST00000474572 TARS2Q9BW92 718 aaKnown RBP10.57□□□□□ -0.72
USP39-214ENST00000474572 CARD9Q9H257 536 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 GOLPH3Q9H4A6 298 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 AZI2Q9H6S1 392 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 ST7Q9NRC1 585 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 MORF4L1Q9UBU8 362 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 COG5Q9UP83 839 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 CNTN6Q9UQ52 1028 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 PTPRJQ12913 1337 aa10.57□□□□□ -0.72
USP39-214ENST00000474572 MGAMO43451 1857 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 H3BQF6 201 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 PGRMC1O00264 195 aaKnown RBP10.56□□□□□ -0.72
USP39-214ENST00000474572 CYP26A1O43174 497 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 GRIN3BO60391 1043 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 HLA-DRAP01903 254 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 FTLP02792 175 aaPredicted RBP10.56□□□□□ -0.72
USP39-214ENST00000474572 CYP1A2P05177 515 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 MMEP08473 750 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 ACO1P21399 889 aaKnown RBP10.56□□□□□ -0.72
USP39-214ENST00000474572 PROZP22891 400 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 PDE6CP51160 858 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 AP3M2P53677 418 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 EPHB4P54760 987 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 NNTQ13423 1086 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 DRP2Q13474 957 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 MXD4Q14582 209 aaPredicted RBP10.56□□□□□ -0.72
USP39-214ENST00000474572 TERF2Q15554 542 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 EMBQ6PCB8 327 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 ZNF467Q7Z7K2 595 aaPredicted RBP10.56□□□□□ -0.72
USP39-214ENST00000474572 DAAM2Q86T65 1068 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 PNMA8AQ86V59 439 aaPredicted RBP10.56□□□□□ -0.72
USP39-214ENST00000474572 SLC47A2Q86VL8 602 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 FBXO16Q8IX29 292 aaPredicted RBP10.56□□□□□ -0.72
USP39-214ENST00000474572 ABRAQ8N0Z2 381 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 UBR7Q8N806 425 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 MS4A4AQ96JQ5 239 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 ZBTB45Q96K62 511 aaPredicted RBP10.56□□□□□ -0.72
USP39-214ENST00000474572 RPS6KC1Q96S38 1066 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 MRPL4Q9BYD3 311 aaKnown RBP10.56□□□□□ -0.72
USP39-214ENST00000474572 C2orf40Q9H1Z8 148 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 ACBD3Q9H3P7 528 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms