RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TCF7L1Q9HCS4 588 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 TLR9Q9NR96 1032 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 MOCS1Q9NZB8 636 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 GPRC5DQ9NZD1 345 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 NCDNQ9UBB6 729 aa4.36□□□□□ -1.71
ECHDC1-213ENST00000474240 UBE2QL1A1L167 161 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 NDUFS2O75306 463 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 ALDH1L1O75891 902 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 S100BP04271 92 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 OSMP13725 252 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 ACO1P21399 889 aaKnown RBP4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 DCAF17Q5H9S7 520 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 DOK3Q7L591 496 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 ZNF627Q7L945 461 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 MRGPRGQ86SM5 289 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 THEMISQ8N1K5 641 aaPredicted RBP4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 MIER2Q8N344 545 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 D2HGDHQ8N465 521 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 OR5M3Q8NGP4 307 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 IL17DQ8TAD2 202 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 CASKIN2Q8WXE0 1202 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 HDAC10Q969S8 669 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 ENKD1Q9H0I2 346 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 EPC1Q9H2F5 836 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 PRDM12Q9H4Q4 367 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 LANCL2Q9NS86 450 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 ING3Q9NXR8 418 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 GIT1Q9Y2X7 761 aa4.35□□□□□ -1.71
ECHDC1-213ENST00000474240 FZD9O00144 591 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 PJA2O43164 708 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 SGTAO43765 313 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 ITGA10O75578 1167 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 HSP90B1P14625 803 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 IL2RBP14784 551 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 MGAT1P26572 445 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 MSX2P35548 267 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 FLT3LGP49771 235 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 PER3P56645 1201 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 SP140Q13342 867 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 MRPL49Q13405 166 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 SAFB2Q14151 953 aaKnown RBP eCLIP4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 ODR4Q5SWX8 454 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 FNDC7Q5VTL7 733 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 FAM83AQ86UY5 434 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 MSL3Q8N5Y2 521 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 JADE3Q92613 823 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 TEKT5Q96M29 485 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 ZNF512Q96ME7 567 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 UHRF1Q96T88 793 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 C7orf25Q9BPX7 421 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 CCDC8Q9H0W5 538 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 METTL14Q9HCE5 456 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 TMEM140Q9NV12 185 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 HECAQ9UBI9 543 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 TRPS1Q9UHF7 1281 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 HDAC5Q9UQL6 1122 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 TNKSO95271 1327 aa4.34□□□□□ -1.71
ECHDC1-213ENST00000474240 CAPN14A8MX76 684 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 GOLGA6L6A8MZA4 724 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 PPFIA4O75335 1185 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 HMGB1P09429 215 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 CT47B1P0C2W7 299 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 GSPT1P15170 499 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 AKAP5P24588 427 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 CCT2P78371 535 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 APBA1Q02410 837 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 FOXL1Q12952 345 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 PIN1Q13526 163 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 TUBA3CQ13748 450 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 TTF1Q15361 905 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 ELAVL1Q15717 326 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 THEMIS2Q5TEJ8 643 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 TUBA3EQ6PEY2 450 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 MAMDC4Q6UXC1 1216 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 ABHD15Q6UXT9 468 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 GSPT2Q8IYD1 628 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 ZNF483Q8TF39 744 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 STAG1Q8WVM7 1258 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 ST8SIA2Q92186 375 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 PUS7Q96PZ0 661 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 AGO3Q9H9G7 860 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 AASDHPPTQ9NRN7 309 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 PNMA8BQ9ULN7 279 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 DNM3Q9UQ16 869 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 PCDHGA2Q9Y5H1 932 aa4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 CFAP20Q9Y6A4 193 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-213ENST00000474240 PPM1GO15355 546 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 HOXA3O43365 443 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 SNRPA1P09661 255 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 C5AR1P21730 350 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 ACRV1P26436 265 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 CASRP41180 1078 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 NOMO1Q15155 1222 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 PCBP2Q15366 365 aaKnown RBP eCLIP4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 PLEKHG6Q3KR16 790 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 FAM47AQ5JRC9 791 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 RRP12Q5JTH9 1297 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 NAIF1Q69YI7 327 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 DRICH1Q6PGQ1 229 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms