RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 PDIA4P13667 645 aaKnown RBP22.43■■□□□ 1.18
APP-215ENST00000474136 AKAP5P24588 427 aa22.43■■□□□ 1.18
APP-215ENST00000474136 CSTF1Q05048 431 aaKnown RBP22.43■■□□□ 1.18
APP-215ENST00000474136 SCRN1Q12765 414 aa22.43■■□□□ 1.18
APP-215ENST00000474136 PPP2R5CQ13362 524 aa22.43■■□□□ 1.18
APP-215ENST00000474136 UBXN2BQ14CS0 331 aa22.43■■□□□ 1.18
APP-215ENST00000474136 MLF2Q15773 248 aaPredicted RBP22.43■■□□□ 1.18
APP-215ENST00000474136 INF2Q27J81 1249 aa22.43■■□□□ 1.18
APP-215ENST00000474136 NOTUMQ6P988 496 aa22.43■■□□□ 1.18
APP-215ENST00000474136 MOXD1Q6UVY6 613 aa22.43■■□□□ 1.18
APP-215ENST00000474136 CCDC83Q8IWF9 413 aa22.43■■□□□ 1.18
APP-215ENST00000474136 BLIDQ8IZY5 108 aa22.43■■□□□ 1.18
APP-215ENST00000474136 DDX23Q9BUQ8 820 aaKnown RBP22.43■■□□□ 1.18
APP-215ENST00000474136 BCO2Q9BYV7 579 aa22.43■■□□□ 1.18
APP-215ENST00000474136 CSRNP2Q9H175 543 aa22.43■■□□□ 1.18
APP-215ENST00000474136 ADAM28Q9UKQ2 775 aa22.43■■□□□ 1.18
APP-215ENST00000474136 CDH7Q9ULB5 785 aa22.43■■□□□ 1.18
APP-215ENST00000474136 KIF3AQ9Y496 699 aa22.43■■□□□ 1.18
APP-215ENST00000474136 P4HBP07237 508 aaKnown RBP22.42■■□□□ 1.18
APP-215ENST00000474136 CD72P21854 359 aa22.42■■□□□ 1.18
APP-215ENST00000474136 PTENP60484 403 aa22.42■■□□□ 1.18
APP-215ENST00000474136 HMGN5P82970 282 aaKnown RBP22.42■■□□□ 1.18
APP-215ENST00000474136 NPY5RQ15761 445 aa22.42■■□□□ 1.18
APP-215ENST00000474136 ZNF528Q3MIS6 628 aa22.42■■□□□ 1.18
APP-215ENST00000474136 SLC44A4Q53GD3 710 aa22.42■■□□□ 1.18
APP-215ENST00000474136 RTP2Q5QGT7 225 aa22.42■■□□□ 1.18
APP-215ENST00000474136 NECAB1Q8N987 351 aa22.42■■□□□ 1.18
APP-215ENST00000474136 RGL1Q9NZL6 768 aa22.42■■□□□ 1.18
APP-215ENST00000474136 KLK14Q9P0G3 267 aa22.42■■□□□ 1.18
APP-215ENST00000474136 FBXW11Q9UKB1 542 aa22.42■■□□□ 1.18
APP-215ENST00000474136 GIT1Q9Y2X7 761 aa22.42■■□□□ 1.18
APP-215ENST00000474136 ZFP37Q9Y6Q3 630 aaPredicted RBP22.42■■□□□ 1.18
APP-215ENST00000474136 FAM170BA6NMN3 283 aa22.41■■□□□ 1.18
APP-215ENST00000474136 INO80B-WBP1J3KQ70 363 aa22.41■■□□□ 1.18
APP-215ENST00000474136 ASAP2O43150 1006 aa22.41■■□□□ 1.18
APP-215ENST00000474136 AXLP30530 894 aa22.41■■□□□ 1.18
APP-215ENST00000474136 YWHABP31946 246 aaKnown RBP22.41■■□□□ 1.18
APP-215ENST00000474136 ATXN1P54253 815 aaKnown RBP22.41■■□□□ 1.18
APP-215ENST00000474136 AMHR2Q16671 573 aa22.41■■□□□ 1.18
APP-215ENST00000474136 XKR9Q5GH70 373 aa22.41■■□□□ 1.18
APP-215ENST00000474136 CDR2LQ86X02 465 aaPredicted RBP22.41■■□□□ 1.18
APP-215ENST00000474136 EXOC8Q8IYI6 725 aa22.41■■□□□ 1.18
APP-215ENST00000474136 GPR65Q8IYL9 337 aa22.41■■□□□ 1.18
APP-215ENST00000474136 ITFG1Q8TB96 612 aa22.41■■□□□ 1.18
APP-215ENST00000474136 TCP11Q8WWU5 503 aa22.41■■□□□ 1.18
APP-215ENST00000474136 FGF13Q92913 245 aa22.41■■□□□ 1.18
APP-215ENST00000474136 CCDC51Q96ER9 411 aa22.41■■□□□ 1.18
APP-215ENST00000474136 AIFM3Q96NN9 605 aa22.41■■□□□ 1.18
APP-215ENST00000474136 PAAF1Q9BRP4 392 aa22.41■■□□□ 1.18
APP-215ENST00000474136 LXNQ9BS40 222 aa22.41■■□□□ 1.18
APP-215ENST00000474136 XPNPEP1Q9NQW7 623 aa22.41■■□□□ 1.18
APP-215ENST00000474136 FBXO4Q9UKT5 387 aa22.41■■□□□ 1.18
APP-215ENST00000474136 SMC3Q9UQE7 1217 aa22.41■■□□□ 1.18
APP-215ENST00000474136 PPME1Q9Y570 386 aa22.41■■□□□ 1.18
APP-215ENST00000474136 MTCL1Q9Y4B5 1905 aaKnown RBP22.4■■□□□ 1.18
APP-215ENST00000474136 SPTLC1O15269 473 aa22.4■■□□□ 1.18
APP-215ENST00000474136 CCL16O15467 120 aa22.4■■□□□ 1.18
APP-215ENST00000474136 DKC1O60832 514 aaKnown RBP eCLIP22.4■■□□□ 1.181e-7■■■■□ 19.3
APP-215ENST00000474136 C4orf19Q8IY42 314 aa22.4■■□□□ 1.18
APP-215ENST00000474136 HASPINQ8TF76 798 aa22.4■■□□□ 1.18
APP-215ENST00000474136 KXD1Q9BQD3 176 aa22.4■■□□□ 1.18
APP-215ENST00000474136 KCNMB3Q9NPA1 279 aa22.4■■□□□ 1.18
APP-215ENST00000474136 ACACBO00763 2458 aa22.4■■□□□ 1.18
APP-215ENST00000474136 B4GALT5O43286 388 aa22.39■■□□□ 1.18
APP-215ENST00000474136 TADA2AO75478 443 aa22.39■■□□□ 1.18
APP-215ENST00000474136 ARF4P18085 180 aaPredicted RBP22.39■■□□□ 1.18
APP-215ENST00000474136 PRKCQQ04759 706 aa22.39■■□□□ 1.18
APP-215ENST00000474136 MBTD1Q05BQ5 628 aa22.39■■□□□ 1.18
APP-215ENST00000474136 DAGLBQ8NCG7 672 aa22.39■■□□□ 1.18
APP-215ENST00000474136 ATRIPQ8WXE1 791 aa22.39■■□□□ 1.18
APP-215ENST00000474136 DYDC2Q96IM9 177 aa22.39■■□□□ 1.18
APP-215ENST00000474136 MTRQ99707 1265 aa22.39■■□□□ 1.18
APP-215ENST00000474136 CLSTN3Q9BQT9 956 aa22.39■■□□□ 1.18
APP-215ENST00000474136 TRIM6Q9C030 488 aaPredicted RBP22.39■■□□□ 1.18
APP-215ENST00000474136 LTB4R2Q9NPC1 389 aa22.39■■□□□ 1.18
APP-215ENST00000474136 POLIQ9UNA4 740 aa22.39■■□□□ 1.18
APP-215ENST00000474136 ADAM12O43184 909 aa22.38■■□□□ 1.17
APP-215ENST00000474136 NPTXRO95502 500 aa22.38■■□□□ 1.17
APP-215ENST00000474136 CREMQ03060 361 aa22.38■■□□□ 1.17
APP-215ENST00000474136 SSRP1Q08945 709 aaKnown RBP22.38■■□□□ 1.17
APP-215ENST00000474136 CTTNQ14247 550 aaKnown RBP22.38■■□□□ 1.17
APP-215ENST00000474136 EPHA7Q15375 998 aa22.38■■□□□ 1.17
APP-215ENST00000474136 PPM1LQ5SGD2 360 aa22.38■■□□□ 1.17
APP-215ENST00000474136 TSSK4Q6SA08 328 aa22.38■■□□□ 1.17
APP-215ENST00000474136 TRIM22Q8IYM9 498 aa22.38■■□□□ 1.17
APP-215ENST00000474136 ASAP3Q8TDY4 903 aa22.38■■□□□ 1.17
APP-215ENST00000474136 FAM20AQ96MK3 541 aa22.38■■□□□ 1.17
APP-215ENST00000474136 PARP2Q9UGN5 583 aa22.38■■□□□ 1.17
APP-215ENST00000474136 SMG5Q9UPR3 1016 aaKnown RBP22.38■■□□□ 1.17
APP-215ENST00000474136 PCDHGA2Q9Y5H1 932 aa22.38■■□□□ 1.17
APP-215ENST00000474136 MYH15Q9Y2K3 1946 aa22.38■■□□□ 1.17
APP-215ENST00000474136 C8AP07357 584 aa22.37■■□□□ 1.17
APP-215ENST00000474136 HNRNPA1P09651 372 aaKnown RBP eCLIP22.37■■□□□ 1.17
APP-215ENST00000474136 CYP4A11Q02928 519 aa22.37■■□□□ 1.17
APP-215ENST00000474136 NCBP1Q09161 790 aaKnown RBP22.37■■□□□ 1.17
APP-215ENST00000474136 GRIK3Q13003 919 aa22.37■■□□□ 1.17
APP-215ENST00000474136 CAPSQ13938 189 aa22.37■■□□□ 1.17
APP-215ENST00000474136 HSP90AA2PQ14568 343 aaPredicted RBP22.37■■□□□ 1.17
APP-215ENST00000474136 PCBP1Q15365 356 aaKnown RBP eCLIP22.37■■□□□ 1.17
APP-215ENST00000474136 LIN9Q5TKA1 542 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms