RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 NR2E1Q9Y466 385 aa22.48■■□□□ 1.19
SNX13-206ENST00000474067 MORC2Q9Y6X9 1032 aaPredicted RBP22.48■■□□□ 1.19
SNX13-206ENST00000474067 NCOR1O75376 2440 aa22.48■■□□□ 1.19
SNX13-206ENST00000474067 DCXO43602 365 aa22.47■■□□□ 1.19
SNX13-206ENST00000474067 TBCAO75347 108 aaKnown RBP22.47■■□□□ 1.19
SNX13-206ENST00000474067 GRM5P41594 1212 aa22.47■■□□□ 1.19
SNX13-206ENST00000474067 HSP90AA2PQ14568 343 aaPredicted RBP22.47■■□□□ 1.19
SNX13-206ENST00000474067 ZPBP2Q6X784 338 aa22.47■■□□□ 1.19
SNX13-206ENST00000474067 KCNK18Q7Z418 384 aa22.47■■□□□ 1.19
SNX13-206ENST00000474067 DAW1Q8N136 415 aa22.47■■□□□ 1.19
SNX13-206ENST00000474067 SUSD6Q92537 303 aa22.47■■□□□ 1.19
SNX13-206ENST00000474067 ACO2Q99798 780 aaKnown RBP22.47■■□□□ 1.19
SNX13-206ENST00000474067 ADAM7Q9H2U9 754 aa22.47■■□□□ 1.19
SNX13-206ENST00000474067 SFXN1Q9H9B4 322 aa22.47■■□□□ 1.19
SNX13-206ENST00000474067 REV3LO60673 3130 aa22.47■■□□□ 1.19
SNX13-206ENST00000474067 TOM1L1O75674 476 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 FAM13AO94988 1023 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 TMEM31Q5JXX7 168 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 FUT10Q6P4F1 479 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 MPZL3Q6UWV2 235 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 CYP26C1Q6V0L0 522 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 GPBP1Q86WP2 473 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 GSTCDQ8NEC7 633 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 BCL7CQ8WUZ0 217 aaPredicted RBP22.46■■□□□ 1.19
SNX13-206ENST00000474067 LARP4BQ92615 738 aaKnown RBP22.46■■□□□ 1.19
SNX13-206ENST00000474067 ZNF396Q96N95 335 aaPredicted RBP22.46■■□□□ 1.19
SNX13-206ENST00000474067 PLIN2Q99541 437 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 PARVGQ9HBI0 331 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 MARCH5Q9NX47 278 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 MIOSQ9NXC5 875 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 GDAQ9Y2T3 454 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 SRPRBQ9Y5M8 271 aaKnown RBP22.46■■□□□ 1.19
SNX13-206ENST00000474067 VCANP13611 3396 aa22.46■■□□□ 1.19
SNX13-206ENST00000474067 XIRP2A4UGR9 3374 aa22.45■■□□□ 1.18
SNX13-206ENST00000474067 SLC16A4O15374 487 aa22.45■■□□□ 1.18
SNX13-206ENST00000474067 TRAPPC3O43617 180 aa22.45■■□□□ 1.18
SNX13-206ENST00000474067 DSG1Q02413 1049 aa22.45■■□□□ 1.18
SNX13-206ENST00000474067 RESTQ13127 1097 aa22.45■■□□□ 1.18
SNX13-206ENST00000474067 MAPK7Q13164 816 aa22.45■■□□□ 1.18
SNX13-206ENST00000474067 ATAT1Q5SQI0 421 aa22.45■■□□□ 1.18
SNX13-206ENST00000474067 NT5DC1Q5TFE4 455 aa22.45■■□□□ 1.18
SNX13-206ENST00000474067 RNF168Q8IYW5 571 aaPredicted RBP22.45■■□□□ 1.18
SNX13-206ENST00000474067 KRI1Q8N9T8 703 aaKnown RBP22.45■■□□□ 1.18
SNX13-206ENST00000474067 VN1R2Q8NFZ6 395 aa22.45■■□□□ 1.18
SNX13-206ENST00000474067 HDAC7Q8WUI4 952 aa22.45■■□□□ 1.18
SNX13-206ENST00000474067 KCNN1Q92952 543 aa22.45■■□□□ 1.18
SNX13-206ENST00000474067 KLHL5Q96PQ7 755 aa22.45■■□□□ 1.18
SNX13-206ENST00000474067 S1PR5Q9H228 398 aa22.45■■□□□ 1.18
SNX13-206ENST00000474067 B4GALT3O60512 393 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 BRD1O95696 1058 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 PLCG1P19174 1290 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 DDIT3P35638 169 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 MYH11P35749 1972 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 RAD51AP2Q09MP3 1159 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 EEF1DP3Q658K8 133 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 SYCE2Q6PIF2 218 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 RAD54LQ92698 747 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 BICD1Q96G01 975 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 DDX27Q96GQ7 796 aaKnown RBP22.44■■□□□ 1.18
SNX13-206ENST00000474067 FBXL18Q96ME1 805 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 ACAP3Q96P50 834 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 FNIP2Q9P278 1114 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 GTF3C3Q9Y5Q9 886 aa22.44■■□□□ 1.18
SNX13-206ENST00000474067 C2CD2LO14523 706 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 CLDN3O15551 220 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 GPR37L1O60883 481 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 GLUD1P00367 558 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 CNPP09543 421 aaKnown RBP22.43■■□□□ 1.18
SNX13-206ENST00000474067 MATR3P43243 847 aaKnown RBP eCLIP22.43■■□□□ 1.187e-6■■■■□ 23
SNX13-206ENST00000474067 NCKAP1LP55160 1127 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 NOLC1Q14978 699 aaKnown RBP eCLIP22.43■■□□□ 1.18
SNX13-206ENST00000474067 KARSQ15046 597 aaKnown RBP22.43■■□□□ 1.18
SNX13-206ENST00000474067 CCDC73Q6ZRK6 1079 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 MYCT1Q8N699 235 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 TMEM161BQ8NDZ6 487 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 SLC22A17Q8WUG5 538 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 AUTS2Q8WXX7 1259 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 TARS2Q9BW92 718 aaKnown RBP22.43■■□□□ 1.18
SNX13-206ENST00000474067 CDT1Q9H211 546 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 RXFP1Q9HBX9 757 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 POLD4Q9HCU8 107 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 CHST7Q9NS84 486 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 MTMR6Q9Y217 621 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 CLIC4Q9Y696 253 aa22.43■■□□□ 1.18
SNX13-206ENST00000474067 SPTBN5Q9NRC6 3674 aaKnown RBP22.43■■□□□ 1.18
SNX13-206ENST00000474067 TTLL13PA6NNM8 815 aa22.42■■□□□ 1.18
SNX13-206ENST00000474067 SFI1A8K8P3 1242 aa22.42■■□□□ 1.18
SNX13-206ENST00000474067 LOC730098B7Z3J9 87 aa22.42■■□□□ 1.18
SNX13-206ENST00000474067 TMEM189-UBE2V1I3L0A0 370 aa22.42■■□□□ 1.18
SNX13-206ENST00000474067 MAPTP10636 758 aaKnown RBP22.42■■□□□ 1.18
SNX13-206ENST00000474067 CLCN4P51793 760 aa22.42■■□□□ 1.18
SNX13-206ENST00000474067 PTPAQ15257 358 aa22.42■■□□□ 1.18
SNX13-206ENST00000474067 RRAGBQ5VZM2 374 aa22.42■■□□□ 1.18
SNX13-206ENST00000474067 C15orf39Q6ZRI6 1047 aa22.42■■□□□ 1.18
SNX13-206ENST00000474067 REEP2Q9BRK0 252 aa22.42■■□□□ 1.18
SNX13-206ENST00000474067 VN1R3Q9BXE9 311 aa22.42■■□□□ 1.18
SNX13-206ENST00000474067 LRRC27Q9C0I9 530 aa22.42■■□□□ 1.18
SNX13-206ENST00000474067 PLEKHA4Q9H4M7 779 aa22.42■■□□□ 1.18
SNX13-206ENST00000474067 PTPRHQ9HD43 1115 aa22.42■■□□□ 1.18
SNX13-206ENST00000474067 CD320Q9NPF0 282 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms