RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TBX4P57082 545 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 FAPQ12884 760 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 PAK1Q13153 545 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 MTMR1Q13613 665 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 SURF1Q15526 300 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 CLUL1Q15846 466 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 ATP13A4Q4VNC1 1196 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 TRIM61Q5EBN2 209 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 IQCEQ6IPM2 695 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 ZCCHC8Q6NZY4 707 aaKnown RBP2.94□□□□□ -1.94
CALD1-216ENST00000473714 KCNT2Q6UVM3 1135 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 KSR2Q6VAB6 950 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 AMOTL1Q8IY63 956 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 CNTD1Q8N815 330 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 IGSF22Q8N9C0 903 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 PPM1EQ8WY54 764 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 DIO2Q92813 273 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 DCPSQ96C86 337 aaKnown RBP2.94□□□□□ -1.94
CALD1-216ENST00000473714 UIMC1Q96RL1 719 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 JMJD8Q96S16 334 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 CCDC8Q9H0W5 538 aaPredicted RBP2.94□□□□□ -1.94
CALD1-216ENST00000473714 TRIM39Q9HCM9 518 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 AP5S1Q9NUS5 200 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 THG1LQ9NWX6 298 aaKnown RBP2.94□□□□□ -1.94
CALD1-216ENST00000473714 ZNF180Q9UJW8 692 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 APOBEC2Q9Y235 224 aaKnown RBP2.94□□□□□ -1.94
CALD1-216ENST00000473714 BACE2Q9Y5Z0 518 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 MRFAP1Q9Y605 127 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 ATRNL1Q5VV63 1379 aa2.94□□□□□ -1.94
CALD1-216ENST00000473714 COL3A1P02461 1466 aaPredicted RBP2.94□□□□□ -1.94
CALD1-216ENST00000473714 WASHC2AQ641Q2 1341 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 TTC21BQ7Z4L5 1316 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 LAMB1P07942 1786 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 NPC1L1Q9UHC9 1359 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 TRBV23OR9-2A0A075B6M9 112 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 NPHP3-ACAD11A0A0J9YXS1 232 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 SHTN1A0MZ66 631 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 NPEPPSL1A6NEC2 478 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 MROH6A6NGR9 719 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 MANSC4A6NHS7 340 aaPredicted RBP2.93□□□□□ -1.94
CALD1-216ENST00000473714 NEMP1O14524 444 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 SRGAP3O43295 1099 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 TSPAN6O43657 245 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 EIF5BO60841 1220 aaKnown RBP2.93□□□□□ -1.94
CALD1-216ENST00000473714 THBDP07204 575 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 CCL5P13501 91 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 PAMP19021 973 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 LTBRP36941 435 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 GMPSP49915 693 aaPredicted RBP2.93□□□□□ -1.94
CALD1-216ENST00000473714 NANOS3P60323 173 aaKnown RBP2.93□□□□□ -1.94
CALD1-216ENST00000473714 GPR85P60893 370 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 CRY1Q16526 586 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 NFE2Q16621 373 aaPredicted RBP2.93□□□□□ -1.94
CALD1-216ENST00000473714 PTPN21Q16825 1174 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 BICRALQ6AI39 1079 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 ZNF585AQ6P3V2 769 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 PGM2L1Q6PCE3 622 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 CRTC3Q6UUV7 619 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 MOB2Q70IA6 237 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 DGLUCYQ7Z3D6 616 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 DNAJC10Q8IXB1 793 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 RAVER1Q8IY67 606 aaKnown RBP2.93□□□□□ -1.94
CALD1-216ENST00000473714 EXOC8Q8IYI6 725 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 NXPE1Q8N323 547 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 TMEM52Q8NDY8 209 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 GSTCDQ8NEC7 633 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 PRSS33Q8NF86 280 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 USP33Q8TEY7 942 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 COG1Q8WTW3 980 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 ALG3Q92685 438 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 ZBTB8AQ96BR9 441 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 CHMP4CQ96CF2 233 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 HOOK2Q96ED9 719 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 CDCA5Q96FF9 252 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 PAWRQ96IZ0 340 aaKnown RBP2.93□□□□□ -1.94
CALD1-216ENST00000473714 NOX5Q96PH1 765 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 KCNJ15Q99712 375 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 PRRX2Q99811 253 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 ZFYVE21Q9BQ24 234 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 SEMA4AQ9H3S1 761 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 PRR13Q9NZ81 148 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 CLEC1BQ9P126 229 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 IP6K2Q9UHH9 426 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 NARFQ9UHQ1 456 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 CNOT7Q9UIV1 285 aaKnown RBP2.93□□□□□ -1.94
CALD1-216ENST00000473714 TRHDEQ9UKU6 1024 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 COQ6Q9Y2Z9 468 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 TCAF1Q9Y4C2 921 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 SPEF1Q9Y4P9 236 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 PCDHA2Q9Y5H9 948 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 SNED1Q8TER0 1413 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 REV3LO60673 3130 aa2.93□□□□□ -1.94
CALD1-216ENST00000473714 PTPDC1A2A3K4 754 aa2.92□□□□□ -1.94
CALD1-216ENST00000473714 CCDC66A2RUB6 948 aa2.92□□□□□ -1.94
CALD1-216ENST00000473714 FAM47E-STBD1D6RA91 191 aa2.92□□□□□ -1.94
CALD1-216ENST00000473714 PROB1E7EW31 1015 aa2.92□□□□□ -1.94
CALD1-216ENST00000473714 NPIPB8E9PQR5 432 aa2.92□□□□□ -1.94
CALD1-216ENST00000473714 UBE2Q2LH0YL09 131 aa2.92□□□□□ -1.94
CALD1-216ENST00000473714 H7C1D1 291 aa2.92□□□□□ -1.94
CALD1-216ENST00000473714 MUSKO15146 869 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms