RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 TSHZ1Q6ZSZ6 1077 aa11.68□□□□□ -0.54
SP140-208ENST00000473711 SESTD1Q86VW0 696 aa11.68□□□□□ -0.54
SP140-208ENST00000473711 CCDC150Q8NCX0 1101 aa11.68□□□□□ -0.54
SP140-208ENST00000473711 CCDC127Q96BQ5 260 aa11.68□□□□□ -0.54
SP140-208ENST00000473711 DDX27Q96GQ7 796 aaKnown RBP11.68□□□□□ -0.54
SP140-208ENST00000473711 GLT1D1Q96MS3 346 aa11.68□□□□□ -0.54
SP140-208ENST00000473711 DEFB118Q96PH6 123 aa11.68□□□□□ -0.54
SP140-208ENST00000473711 POP1Q99575 1024 aaKnown RBP11.68□□□□□ -0.54
SP140-208ENST00000473711 NUP58Q9BVL2 599 aa11.68□□□□□ -0.54
SP140-208ENST00000473711 LSM14BQ9BX40 385 aaKnown RBP11.68□□□□□ -0.54
SP140-208ENST00000473711 PTPRHQ9HD43 1115 aa11.68□□□□□ -0.54
SP140-208ENST00000473711 TTC26A0AVF1 554 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 LRRIQ3A6PVS8 624 aaPredicted RBP11.67□□□□□ -0.54
SP140-208ENST00000473711 RBAK-RBAKDNI3L0D1 243 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 ABLIM1O14639 778 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 OGTO15294 1046 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 TSPAN1O60635 241 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 ERLIN2O94905 339 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 DARSP14868 501 aaKnown RBP11.67□□□□□ -0.54
SP140-208ENST00000473711 ARF4P18085 180 aaPredicted RBP11.67□□□□□ -0.54
SP140-208ENST00000473711 TRIM21P19474 475 aaKnown RBP11.67□□□□□ -0.54
SP140-208ENST00000473711 SLC9A1P19634 815 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 PROZP22891 400 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 GCLMP48507 274 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 FXR1P51114 621 aaKnown RBP eCLIP11.67□□□□□ -0.54
SP140-208ENST00000473711 CRYBB1P53674 252 aaPredicted RBP11.67□□□□□ -0.54
SP140-208ENST00000473711 MRPS6P82932 125 aaKnown RBP11.67□□□□□ -0.54
SP140-208ENST00000473711 MCL1Q07820 350 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 PPP3CAQ08209 521 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 TRIM14Q14142 442 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 ZNF568Q3ZCX4 644 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 CBWD6Q4V339 395 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 CBWD3Q5JTY5 395 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 CBWD5Q5RIA9 395 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 C1orf220Q5T0J3 134 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 MPZL3Q6UWV2 235 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 GBP6Q6ZN66 633 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 CATSPER4Q7RTX7 472 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 RSPH3Q86UC2 560 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 THNSL1Q8IYQ7 743 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 TC2NQ8N9U0 490 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 NEK11Q8NG66 645 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 PARD3BQ8TEW8 1205 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 WNT8BQ93098 351 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 PRIMPOLQ96LW4 560 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 CELF4Q9BZC1 486 aaKnown RBP11.67□□□□□ -0.54
SP140-208ENST00000473711 RNF208Q9H0X6 261 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 FAM207AQ9NSI2 230 aaPredicted RBP11.67□□□□□ -0.54
SP140-208ENST00000473711 CAPN11Q9UMQ6 739 aa11.67□□□□□ -0.54
SP140-208ENST00000473711 CNTNAP2Q9UHC6 1331 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 A0A1W2PQ45 241 aaPredicted RBP11.66□□□□□ -0.54
SP140-208ENST00000473711 A0A1W2PQY0 241 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 KBTBD13C9JR72 458 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 EPHB6O15197 1021 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 DLATP10515 647 aaKnown RBP11.66□□□□□ -0.54
SP140-208ENST00000473711 ACTN1P12814 892 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 EIF4BP23588 611 aaKnown RBP11.66□□□□□ -0.54
SP140-208ENST00000473711 KRT9P35527 623 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 TNFSF9P41273 254 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 LBX1P52954 281 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 MCCD1P59942 119 aaPredicted RBP11.66□□□□□ -0.54
SP140-208ENST00000473711 OSTNP61366 133 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 APBA1Q02410 837 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 PTPN11Q06124 597 aaPredicted RBP11.66□□□□□ -0.54
SP140-208ENST00000473711 NCBP1Q09161 790 aaKnown RBP11.66□□□□□ -0.54
SP140-208ENST00000473711 HSP90AA2PQ14568 343 aaPredicted RBP11.66□□□□□ -0.54
SP140-208ENST00000473711 NOLC1Q14978 699 aaKnown RBP eCLIP11.66□□□□□ -0.54
SP140-208ENST00000473711 PSMD6Q15008 389 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 SNX17Q15036 470 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 EXOC3L4Q17RC7 722 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 CTU1Q7Z7A3 348 aaKnown RBP11.66□□□□□ -0.54
SP140-208ENST00000473711 SERINC5Q86VE9 423 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 TMEM40Q8WWA1 233 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 CDT1Q9H211 546 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 PDZD7Q9H5P4 517 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 PDE11AQ9HCR9 933 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 PAK6Q9NQU5 681 aaPredicted RBP11.66□□□□□ -0.54
SP140-208ENST00000473711 STARD7Q9NQZ5 370 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 TOPORSQ9NS56 1045 aaPredicted RBP11.66□□□□□ -0.54
SP140-208ENST00000473711 TRMT13Q9NUP7 481 aaKnown RBP11.66□□□□□ -0.54
SP140-208ENST00000473711 RBAKQ9NYW8 714 aaPredicted RBP11.66□□□□□ -0.54
SP140-208ENST00000473711 PHF24Q9UPV7 400 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 NOD1Q9Y239 953 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 LUC7L2Q9Y383 392 aaKnown RBP11.66□□□□□ -0.54
SP140-208ENST00000473711 TRPV2Q9Y5S1 764 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 CDY2AQ9Y6F7 541 aa11.66□□□□□ -0.54
SP140-208ENST00000473711 SIP14410 1827 aa11.65□□□□□ -0.54
SP140-208ENST00000473711 SCN10AQ9Y5Y9 1956 aa11.65□□□□□ -0.54
SP140-208ENST00000473711 A0A0U1RQG5 324 aaPredicted RBP11.65□□□□□ -0.54
SP140-208ENST00000473711 A0A1B0GUA9 196 aa11.65□□□□□ -0.54
SP140-208ENST00000473711 M0QZ92 97 aa11.65□□□□□ -0.54
SP140-208ENST00000473711 ARHGAP33O14559 1287 aa11.65□□□□□ -0.54
SP140-208ENST00000473711 STX10O60499 249 aa11.65□□□□□ -0.54
SP140-208ENST00000473711 MFAP3LO75121 409 aa11.65□□□□□ -0.54
SP140-208ENST00000473711 NOL4O94818 638 aa11.65□□□□□ -0.54
SP140-208ENST00000473711 CTSHP09668 335 aa11.65□□□□□ -0.54
SP140-208ENST00000473711 MCF2P10911 925 aa11.65□□□□□ -0.54
SP140-208ENST00000473711 PON1P27169 355 aa11.65□□□□□ -0.54
SP140-208ENST00000473711 HOXA11P31270 313 aaPredicted RBP11.65□□□□□ -0.54
SP140-208ENST00000473711 THPOP40225 353 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms