RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 CALCOCO1Q9P1Z2 691 aa4.4□□□□□ -1.71
CLCC1-208ENST00000473062 THRAP3Q9Y2W1 955 aaKnown RBP4.4□□□□□ -1.71
CLCC1-208ENST00000473062 DUSP10Q9Y6W6 482 aa4.4□□□□□ -1.71
CLCC1-208ENST00000473062 CCDC154A6NI56 674 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 GOLGA6L6A8MZA4 724 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 PATE3B3GLJ2 98 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 MATN2O00339 956 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 KIF3BO15066 747 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 HOXA3O43365 443 aaPredicted RBP4.39□□□□□ -1.71
CLCC1-208ENST00000473062 ZNF623O75123 536 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 PPFIA4O75335 1185 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 SCGB1D2O95969 90 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 MSX2P35548 267 aaPredicted RBP4.39□□□□□ -1.71
CLCC1-208ENST00000473062 CASRP41180 1078 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 ADAM8P78325 824 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 PPP3CAQ08209 521 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 ELAVL1Q15717 326 aaKnown RBP4.39□□□□□ -1.71
CLCC1-208ENST00000473062 PGS1Q32NB8 556 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 FAM47AQ5JRC9 791 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 TCTN3Q6NUS6 607 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 USP45Q70EL2 814 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 ZNF572Q7Z3I7 529 aaPredicted RBP4.39□□□□□ -1.71
CLCC1-208ENST00000473062 GPR135Q8IZ08 494 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 MYO1HQ8N1T3 1032 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 MSL3Q8N5Y2 521 aaKnown RBP4.39□□□□□ -1.71
CLCC1-208ENST00000473062 ST8SIA2Q92186 375 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 HOXB13Q92826 284 aaPredicted RBP4.39□□□□□ -1.71
CLCC1-208ENST00000473062 C1GALT1C1Q96EU7 318 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 LOXL4Q96JB6 756 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 ZNF512Q96ME7 567 aaPredicted RBP4.39□□□□□ -1.71
CLCC1-208ENST00000473062 SLC2A13Q96QE2 648 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 FAM204AQ9H8W3 233 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 DMRT3Q9NQL9 472 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 HECAQ9UBI9 543 aaPredicted RBP4.39□□□□□ -1.71
CLCC1-208ENST00000473062 TUBD1Q9UJT1 453 aa4.39□□□□□ -1.71
CLCC1-208ENST00000473062 CAPN14A8MX76 684 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 HTRA2O43464 458 aaPredicted RBP4.38□□□□□ -1.71
CLCC1-208ENST00000473062 POU2F2P09086 479 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 MTHFD1P11586 935 aaKnown RBP4.38□□□□□ -1.71
CLCC1-208ENST00000473062 PDCP20941 246 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 SMARCA1P28370 1054 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 SREBF1P36956 1147 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 MXRA7P84157 204 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 CCDC157Q569K6 752 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 DRICH1Q6PGQ1 229 aaPredicted RBP4.38□□□□□ -1.71
CLCC1-208ENST00000473062 SGMS1Q86VZ5 419 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 TRMT2AQ8IZ69 625 aaKnown RBP4.38□□□□□ -1.71
CLCC1-208ENST00000473062 FUKQ8N0W3 1084 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 MAGEB6Q8N7X4 407 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 C3orf20Q8ND61 904 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 EDAQ92838 391 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 MVB12AQ96EY5 273 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 FAM193BQ96PV7 902 aaPredicted RBP4.38□□□□□ -1.71
CLCC1-208ENST00000473062 ENKD1Q9H0I2 346 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 PRDM11Q9NQV5 511 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 C1orf112Q9NSG2 853 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 IPPQ9Y573 584 aa4.38□□□□□ -1.71
CLCC1-208ENST00000473062 A0A0G2JLL6 359 aaPredicted RBP4.37□□□□□ -1.71
CLCC1-208ENST00000473062 DIRC3C9JPN6 131 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 PRICKLE3O43900 615 aaPredicted RBP4.37□□□□□ -1.71
CLCC1-208ENST00000473062 RECQL4O94761 1208 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 ZRANB2O95218 330 aaKnown RBP eCLIP4.37□□□□□ -1.71
CLCC1-208ENST00000473062 SPATA31D3P0C874 917 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 RAP2AP10114 183 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 ATP5JP18859 108 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 DDCP20711 480 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 GUCY1A2P33402 732 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 CTXN1P60606 82 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 DUSP8Q13202 625 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 CRHR2Q13324 411 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 CNGB1Q14028 1251 aaPredicted RBP4.37□□□□□ -1.71
CLCC1-208ENST00000473062 SAFB2Q14151 953 aaKnown RBP eCLIP4.37□□□□□ -1.71
CLCC1-208ENST00000473062 ODF1Q14990 250 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 PRKD1Q15139 912 aaPredicted RBP4.37□□□□□ -1.71
CLCC1-208ENST00000473062 SPATS1Q496A3 300 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 PRAMEF14Q5SWL7 426 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 OTUD7BQ6GQQ9 843 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 EFCAB12Q6NXP0 572 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 SPATA31D4Q6ZUB0 917 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 FMNL3Q8IVF7 1028 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 CAMKK1Q8N5S9 505 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 MDGA1Q8NFP4 955 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 DNERQ8NFT8 737 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 MDM1Q8TC05 714 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 RGMAQ96B86 450 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 TMEM176AQ96HP8 235 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 CDK5RAP3Q96JB5 506 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 C8orf48Q96LL4 319 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 GNRHR2Q96P88 292 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 CPPED1Q9BRF8 314 aaPredicted RBP4.37□□□□□ -1.71
CLCC1-208ENST00000473062 RTFDC1Q9BY42 306 aaPredicted RBP4.37□□□□□ -1.71
CLCC1-208ENST00000473062 WDCPQ9H6R7 721 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 CNNM1Q9NRU3 951 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 SMPD4Q9NXE4 827 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 FAM30AQ9NZY2 134 aa4.37□□□□□ -1.71
CLCC1-208ENST00000473062 AJAP1Q9UKB5 411 aaPredicted RBP4.37□□□□□ -1.71
CLCC1-208ENST00000473062 MYBBP1AQ9BQG0 1328 aaKnown RBP4.37□□□□□ -1.71
CLCC1-208ENST00000473062 GPR42O15529 346 aa4.36□□□□□ -1.71
CLCC1-208ENST00000473062 AMHP03971 560 aa4.36□□□□□ -1.71
CLCC1-208ENST00000473062 GNAI3P08754 354 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms