RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 USP41Q3LFD5 358 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 NT5DC1Q5TFE4 455 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 KRT79Q5XKE5 535 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 EEF1DP3Q658K8 133 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 DTHD1Q6ZMT9 781 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 ZBTB33Q86T24 672 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 UBALD2Q8IYN6 164 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 FBXL6Q8N531 539 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 RABGGTAQ92696 567 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 TMX3Q96JJ7 454 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 PAAF1Q9BRP4 392 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 ADPGKQ9BRR6 497 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 KIFC3Q9BVG8 833 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 RHOBTB2Q9BYZ6 727 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 MAN1C1Q9NR34 630 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.86■□□□□ 0.29
VTI1A-203ENST00000472892 FNIP2Q9P278 1114 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 LIMD1Q9UGP4 676 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 SORCS3Q9UPU3 1222 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 PP2D1A8MPX8 630 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 E9PMD0 336 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 TADA2AO75478 443 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 RECQL4O94761 1208 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 PAPLNO95428 1278 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 GLUD1P00367 558 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 THP07101 528 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 LIG1P18858 919 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 CDC25AP30304 524 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 MTMR3Q13615 1198 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 HSP90AA2PQ14568 343 aaPredicted RBP16.85■□□□□ 0.29
VTI1A-203ENST00000472892 TMEM132AQ24JP5 1023 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 RILPL1Q5EBL4 403 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 CYP26C1Q6V0L0 522 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 SUGP1Q8IWZ8 645 aaKnown RBP16.85■□□□□ 0.29
VTI1A-203ENST00000472892 TDRD5Q8NAT2 981 aaKnown RBP16.85■□□□□ 0.29
VTI1A-203ENST00000472892 HDAC7Q8WUI4 952 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 B3GALT6Q96L58 329 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 MMTAG2Q9BU76 263 aaKnown RBP16.85■□□□□ 0.29
VTI1A-203ENST00000472892 CXCL16Q9H2A7 254 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 ZNF318Q5VUA4 2279 aa16.85■□□□□ 0.29
VTI1A-203ENST00000472892 TDRD15B5MCY1 1934 aaKnown RBP16.84■□□□□ 0.29
VTI1A-203ENST00000472892 K7ERI5 159 aa16.84■□□□□ 0.29
VTI1A-203ENST00000472892 CD2BP2O95400 341 aaKnown RBP16.84■□□□□ 0.29
VTI1A-203ENST00000472892 BRD1O95696 1058 aa16.84■□□□□ 0.29
VTI1A-203ENST00000472892 DCAF4L1Q3SXM0 396 aa16.84■□□□□ 0.29
VTI1A-203ENST00000472892 IER5LQ5T953 404 aa16.84■□□□□ 0.29
VTI1A-203ENST00000472892 ATF7IP2Q5U623 682 aa16.84■□□□□ 0.29
VTI1A-203ENST00000472892 MCTP1Q6DN14 999 aa16.84■□□□□ 0.29
VTI1A-203ENST00000472892 LILRA6Q6PI73 481 aa16.84■□□□□ 0.29
VTI1A-203ENST00000472892 ELMSAN1Q6PJG2 1045 aa16.84■□□□□ 0.29
VTI1A-203ENST00000472892 C1orf186Q6ZWK4 172 aa16.84■□□□□ 0.29
VTI1A-203ENST00000472892 OTOP3Q7RTS5 596 aa16.84■□□□□ 0.29
VTI1A-203ENST00000472892 DAW1Q8N136 415 aa16.84■□□□□ 0.29
VTI1A-203ENST00000472892 ACSF2Q96CM8 615 aaPredicted RBP16.84■□□□□ 0.29
VTI1A-203ENST00000472892 PLEKHA4Q9H4M7 779 aa16.84■□□□□ 0.29
VTI1A-203ENST00000472892 CACNG4Q9UBN1 327 aa16.84■□□□□ 0.29
VTI1A-203ENST00000472892 WDFY4Q6ZS81 3184 aa16.83■□□□□ 0.29
VTI1A-203ENST00000472892 CCDC195A0A1B0GUA6 201 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 CASTOR2A6NHX0 329 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 TGM5O43548 720 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 SF3B1O75533 1304 aaKnown RBP eCLIP16.83■□□□□ 0.28
VTI1A-203ENST00000472892 ASGR2P07307 311 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 GJB2P29033 226 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 NPTX2P47972 431 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 PEX3P56589 373 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 ATP2C1P98194 919 aaPredicted RBP16.83■□□□□ 0.28
VTI1A-203ENST00000472892 NHLH1Q02575 133 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 CREMQ03060 361 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 RINT1Q6NUQ1 792 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 CCDC149Q6ZUS6 474 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 PALB2Q86YC2 1186 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 KCTD17Q8N5Z5 321 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 RIN2Q8WYP3 895 aaPredicted RBP16.83■□□□□ 0.28
VTI1A-203ENST00000472892 TMEM134Q9H6X4 195 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 TNFSF13BQ9Y275 285 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 GDAQ9Y2T3 454 aa16.83■□□□□ 0.28
VTI1A-203ENST00000472892 CCDC169A6NNP5 214 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 HIP1RO75146 1068 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 SPATA31D3P0C874 917 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 MCM2P49736 904 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 MAPK7Q13164 816 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 RTP2Q5QGT7 225 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 HYIQ5T013 277 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 SPATA31D4Q6ZUB0 917 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 KCNK18Q7Z418 384 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 APBB1IPQ7Z5R6 666 aaPredicted RBP16.82■□□□□ 0.28
VTI1A-203ENST00000472892 ZNF707Q96C28 371 aaPredicted RBP16.82■□□□□ 0.28
VTI1A-203ENST00000472892 DRC1Q96MC2 740 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 PRRX2Q99811 253 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 NTPCRQ9BSD7 190 aaKnown RBP16.82■□□□□ 0.28
VTI1A-203ENST00000472892 RUSC1Q9BVN2 902 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 C17orf75Q9HAS0 396 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 UPF2Q9HAU5 1272 aaKnown RBP16.82■□□□□ 0.28
VTI1A-203ENST00000472892 PTPRHQ9HD43 1115 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 WDR6Q9NNW5 1121 aaKnown RBP16.82■□□□□ 0.28
VTI1A-203ENST00000472892 ARHGAP28Q9P2N2 729 aa16.82■□□□□ 0.28
VTI1A-203ENST00000472892 RBM19Q9Y4C8 960 aaKnown RBP16.82■□□□□ 0.28
VTI1A-203ENST00000472892 MYO10Q9HD67 2058 aa16.81■□□□□ 0.28
VTI1A-203ENST00000472892 RFPL2O75678 378 aa16.81■□□□□ 0.28
VTI1A-203ENST00000472892 KIF4AO95239 1232 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms